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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Thecc1EG000362t4 |
| Common Name | TCM_000362 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
|
| Family |
bHLH |
| Protein Properties |
Length: 315aa MW: 35177.1 Da PI: 8.4713 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Thecc1EG000362t4 | genome | CGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 30 | 9.2e-10 | 218 | 265 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq
Thecc1EG000362t4 218 SHSLAERARREKISKKMKCLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 265
8**************************....999*****************9 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009299 | Biological Process | mRNA transcription |
| GO:0009735 | Biological Process | response to cytokinin |
| GO:0009826 | Biological Process | unidimensional cell growth |
| GO:0043425 | Molecular Function | bHLH transcription factor binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 315 aa
Download sequence Send
to blast |
MLRGLHSLET CTYNGMDMTV LERQQARLKW QQQQNYGVQN NNPIELCASS VPQIQGFLGS 60
SFGSGQLVEM KKPEVYLGSD DFPKFVNLSV AGPEFSASKM DLVPPEAAAD YCISRTSSCQ 120
MTAFQTAVMN EEREDVILKK MESTTGRESF NKRKVEAVQD DKCKDKRIKG EVEGESEVKT 180
KCSTEVSRNS SKGNSKASEV QKPDYIHVRA RRGQATDSHS LAERARREKI SKKMKCLQDL 240
VPGCNKITGK AGMLDEIINY VQSLQRQVEF LSMKLAAVNP SVEFNVDNLP AKEPPSHQQW 300
PIWPAFSSIP CKRL*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Atypical bHLH transcription factor that acts as positive regulator of cell elongation downstream of multiple external and endogenous signals by direct binding to the promoters and activation of the two expansin genes EXPA1 and EXPA8, encoding cell wall loosening enzymes. Transcriptional activity is inhibited when binding to the bHLH transcription factor IBH1. {ECO:0000269|PubMed:23221598}. |
