PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_35002-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 412aa    MW: 43773.3 Da    PI: 5.4493
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_35002-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like55.99.3e-183063441856
          G2-like  18 veqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                      v  LG + +AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  TRIUR3_35002-P1 306 VVLLGMIAVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 344
                      56799999*****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
TIGRFAMsTIGR015574.4E-15306344IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.604.4E-15307347IPR009057Homeodomain-like
SuperFamilySSF466891.63E-6309347IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    Send to blast
MGLDVGEIGM GADLSLDLKM FAAKSLGRVR EAPAAAMDDC IRRLGGEKSK IEVFRRELPL  60
CARLLADVID VMKKEVEEKK RGGDRGEDKE DAGAGDKSNW MSTAQLWTGD SVRGDDASEV  120
GSGDSVGCPQ AGCEEEVVGA GRRGVAPAAA VGGCVRRLEE EKSKIEVFRR ELPLCARLLA  180
DVIDVMKKEV EEKKRGGDRG EDKEDAGAGD KSNWMSTAQL WTGDSVRGDD ASEKQDARRR  240
SSEPESHDGA ALPFKAVGSG APAFAPPSLR KDDKAVRMPD LPFLSPAPIK TSPAAATGGA  300
GKAYMVVLLG MIAVATPKQI RELMKVDGLT NDEVKSHLQK YRLHNRRAPG SPAANRPIVL  360
MGGLWITQDQ SSSQSGGSPP GPLHFSSSGV AASSVTVSGE EEDGRSESYG WK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJF9519320.0JF951932.1 Triticum aestivum clone TaMYB49 MYB-related protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020173713.11e-93myb family transcription factor EFM-like
TrEMBLM8A7890.0M8A789_TRIUA; Uncharacterized protein
STRINGTRIUR3_35002-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP181737107
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.15e-25G2-like family protein