PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_34172-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 251aa    MW: 27721.5 Da    PI: 7.6015
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_34172-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like962.9e-301871255
          G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                     pr+rWt+eLH++F+eav+ LGG+++AtPk+il+lm+ kg++++hvkSHLQ+YR+
  TRIUR3_34172-P1 18 PRMRWTEELHRQFIEAVNCLGGQDEATPKRILQLMGAKGVSISHVKSHLQMYRS 71
                     9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.3E-281473IPR009057Homeodomain-like
PROSITE profilePS5129412.2731474IPR017930Myb domain
SuperFamilySSF466891.97E-161672IPR009057Homeodomain-like
TIGRFAMsTIGR015571.8E-231871IPR006447Myb domain, plants
PfamPF002496.1E-91970IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MRGFERRGVR QYNRSDEPRM RWTEELHRQF IEAVNCLGGQ DEATPKRILQ LMGAKGVSIS  60
HVKSHLQMYR SSSSNSTCNG PPNASVDRRG DQRVVDGPWN GHRNGNGMGV ASERIDDASS  120
YPVPSHGHRS PAYQIPSIED VFRSWEHSRG RLPWNSSMPS EKATGWACHA DRSTRQKQQQ  180
QQTAAGCDLT LSIGRWEAEA ASSDADFSSM TTEEAVAPAR DRGAGDHRRS ASVTGLDLDL  240
NLDLAISSSC L
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A2e-171972356Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-171972356Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-171972356Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-171972356Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3716052e-86AK371605.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2138C08.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020178889.11e-153putative Myb family transcription factor At1g14600
TrEMBLT1NTL20.0T1NTL2_TRIUA; Uncharacterized protein
STRINGTRIUR3_34172-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54933758
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14600.12e-24G2-like family protein