PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_34165-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 338aa    MW: 36408.1 Da    PI: 8.2133
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_34165-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_166.35.1e-21241303163
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      e+elkr++rkq+NR +ArrsR+RK+ae+eeL++++++L++eN +Lk+e+++++ke+++l s++
  TRIUR3_34165-P1 241 ERELKRQKRKQSNRDSARRSRLRKQAECEELAQRAEVLKQENASLKDEVSRIRKEYDELLSKN 303
                      89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077775.4E-72146IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165964.3E-3890215No hitNo description
Gene3DG3DSA:1.20.5.1702.8E-19235300No hitNo description
PfamPF001704.4E-20241303IPR004827Basic-leucine zipper domain
SMARTSM003385.2E-21241305IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.082243306IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.56E-10244300No hitNo description
CDDcd147025.86E-22246297No hitNo description
PROSITE patternPS000360248263IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MDVIVVTYIR QQQQTRFQLI RPMMPPYGTP PYVIYPPGGI YAHPSMRPGA HPFAPYTMTS  60
PNGNPDAAGT TTTAATAGGE TNGKSSEGKE KSPIKRSKGS LGSLNMITGK NCVEHGKTSG  120
ASVNGTISQS GESGSESSSE GSEANSQNDS QHKESGQEQD GDVRSSQNGV SPSPSQAQLK  180
QTLAIMQMPS SGPVPGPTTN LNIGMDYWAN TASSSPALHG KVTPTAIPGA VAPTEPWMQD  240
ERELKRQKRK QSNRDSARRS RLRKQAECEE LAQRAEVLKQ ENASLKDEVS RIRKEYDELL  300
SKNSSLKDNV GDKQHKTDEA GLDNKLQHSG DDSQKDTN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1257263RRSRLRK
2257264RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.2}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.2). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.2). {ECO:0000269|Ref.2}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFJ1944570.0FJ194457.1 Triticum aestivum bZip type transcription factor bZIP1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020189928.10.0bZIP transcription factor 16-like
SwissprotA0A3B6KF130.0BZP1A_WHEAT; bZIP transcription factor 1-A
TrEMBLM7YLS60.0M7YLS6_TRIUA; Transcription factor HBP-1a
STRINGTRIUR3_34165-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21473796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.12e-83basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Appels R, et al.
    Shifting the limits in wheat research and breeding using a fully annotated reference genome.
    Science, 2018.
    [PMID:30115783]