PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_33475-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 427aa    MW: 46340.8 Da    PI: 8.5764
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_33475-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.95.7e-10211252546
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                      k +rr+++NReAAr+sR RKka++++Le    +L+   ++L+
  TRIUR3_33475-P1 211 KTARRLAQNREAARKSRIRKKAYLAQLESSRSKLTHLEQELQ 252
                      889*************************99999988777664 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.1E-8204254No hitNo description
SMARTSM003381.1E-6207301IPR004827Basic-leucine zipper domain
PfamPF077164.8E-7209253IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.324209253IPR004827Basic-leucine zipper domain
CDDcd147083.52E-23211262No hitNo description
SuperFamilySSF579596.88E-7211254No hitNo description
PROSITE patternPS000360214229IPR004827Basic-leucine zipper domain
PfamPF141441.1E-26291364IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    Send to blast
MTTRHAHANS PSPHPSPSLL PAAAAVTVVL VLVVNPASSG PRCITTLGLS TSSGAPAALP  60
LAFQELFTLL LDLLLDLCLR VLMYAFAWPC DCEGPNPSSK SSSNVTVANF PSLASPHGVV  120
GSLGMATPGM AFAAAEGRFC TPRAAVQQLE NWGDSLSGIV ITSPLTETST DLDDSGDKHH  180
ALMGGGGAGG GAHSQRRVGC VDSSERTGDE KTARRLAQNR EAARKSRIRK KAYLAQLESS  240
RSKLTHLEQE LQRARQQGIF IAGGGSGDCS SGGALAFDLE YARWLDDHQR HINNLRVAVI  300
ADMGDDELRI LVESVLLHYD EFFRLKNLAT KSDVFHVLSG MWMSPAERFF MWLGGFRSSE  360
ILKSMDGKSH LPQLHAFKDS EWFSVIFKGT SKCAIVIAHL SDTIKYRKEK KKAKENYHTN  420
LRIRSMP
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFP1013771e-36FP101377.1 Phyllostachys edulis cDNA clone: bphyem204e13, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020155511.11e-153transcription factor TGAL3-like
SwissprotQ5Z6N93e-97TGAL3_ORYSJ; Transcription factor TGAL3
TrEMBLM8AE940.0M8AE94_TRIUA; Transcription factor HBP-1b(C1)
STRINGTRIUR3_33475-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP6063422
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.59e-66TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]