PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_33471-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 135aa    MW: 14370.7 Da    PI: 10.3646
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_33471-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.99.7e-102421055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                     + RR+ri +++  L+el+P+a      K +Ka++L + ++Y+k Lq
  TRIUR3_33471-P1  2 QLRRERIAERMKSLQELVPNA-----NKTDKASMLDEIIDYVKFLQ 42
                     56******************8.....6******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.005141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.8E-7247IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.3E-13351IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-13363IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.3E-7342IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.46E-10446No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    Send to blast
MQLRRERIAE RMKSLQELVP NANKTDKASM LDEIIDYVKF LQLQVKVLSM SRLGGAAGMA  60
PLVASMSSEG HHGLAPLGRS VARALGVTVW RRVVAATARR CGSGVTDNVD GGVCLSCGRR  120
SGWQATQVGG CCPTS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015693472.16e-38PREDICTED: transcription factor bHLH69-like
TrEMBLA0A446X4W24e-93A0A446X4W2_TRITD; Uncharacterized protein
TrEMBLM7YN074e-93M7YN07_TRIUA; Transcription factor bHLH69
STRINGTRIUR3_33471-P17e-94(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP141937118
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30980.11e-32LJRHL1-like 2