PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_33147-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 477aa MW: 53996 Da PI: 10.1986 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 111.7 | 8.3e-35 | 46 | 188 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkklelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra............t 78 p+G++F+Ptd+el+ e+L+ kv ++ ++l + +i+ +i++++P++Lp v+ + ++ +fF++ +k+y+tg+rk+r+ TRIUR3_33147-P1 46 PAGVKFDPTDQELI-EHLESKVMKRAHSLIDdfipTIEGEdGICYTHPEKLP-GVTRNGQSKHFFHRPSKAYTTGTRKRRKihaetelsnsknG 137 89************.99*****99996654423223555545**********.555667899******************87899888886654 PP NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 ++ +W++tgk++++++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l TRIUR3_33147-P1 138 AETRWHKTGKTRPLMV-GGQHKGCKKILVLYinFGKTRKAEKTNWVMHQYHL 188 4678************.99************766899*************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.84E-35 | 36 | 207 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 31.804 | 45 | 207 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.1E-15 | 46 | 188 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 477 aa Download sequence Send to blast |
MDKGHPGYSK YMIDAKLQEQ GFFASQHCAN CGHELHHKPK DMVGFPAGVK FDPTDQELIE 60 HLESKVMKRA HSLIDDFIPT IEGEDGICYT HPEKLPGVTR NGQSKHFFHR PSKAYTTGTR 120 KRRKIHAETE LSNSKNGAET RWHKTGKTRP LMVGGQHKGC KKILVLYINF GKTRKAEKTN 180 WVMHQYHLGD LEDEKEGELI VSKVFYQTQP RQTAAATTST VLREPSTNGN MEVKMPKSMK 240 IGLTDHAVAA AAAIQMQRQQ QQLLKQGDEM KKGKEGQDQL QQKFDHRPAG LEGLIMACKS 300 ASTKEVSFLI KEPRTVCESE VQDGVEDSET RTKLRGSPWC CKAKMRKSCI LVLSSAFWSG 360 RRRRLHRNLL GGVALEVHLL AVVWSSPTVM GDRRAMCFFL IRPSRSLSVY GPTAANRKDD 420 FFNELIAQKP PSELNGSPWM TSTKFTELAI RTNEVVNRTR INRFWATLTP ANSKRFF |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | FN564430 | 0.0 | FN564430.1 Triticum aestivum chromosome 3B-specific BAC library, contig ctg0464b. | |||
GenBank | HG670306 | 0.0 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020156234.1 | 0.0 | NAC domain-containing protein 73-like | ||||
Refseq | XP_020156242.1 | 0.0 | NAC domain-containing protein 73-like | ||||
TrEMBL | M7Y5I1 | 0.0 | M7Y5I1_TRIUA; NAC domain-containing protein 8 | ||||
STRING | TRIUR3_33147-P1 | 0.0 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1453 | 38 | 117 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29230.1 | 5e-93 | NAC domain containing protein 75 |