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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_32723-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 161aa MW: 17330.8 Da PI: 10.0932 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 34.3 | 4.7e-11 | 104 | 125 | 1 | 22 |
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 ldDgy+WrKYGqK+vk++++pr TRIUR3_32723-P1 104 LDDGYKWRKYGQKVVKNTQHPR 125 59*******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 5.0E-13 | 89 | 126 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 5.23E-10 | 96 | 126 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 12.84 | 99 | 125 | IPR003657 | WRKY domain |
SMART | SM00774 | 5.6E-5 | 104 | 150 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.3E-7 | 105 | 126 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence Send to blast |
MVLRCISGDR DVLSCLHAGR RSCEEADRER QRGKGAVAGM GINSAAAGGS GGGERSHGSS 60 AAAAGMGVGA VRMKKAAGGG AVKARRKVRE PRFCFKTMSD VDVLDDGYKW RKYGQKVVKN 120 TQHPRYALYI DIAPPTLDVT HIYIRYICAC VRFYEATASS N |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HG670306 | 1e-164 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020149424.1 | 2e-40 | probable WRKY transcription factor 13 | ||||
TrEMBL | M7ZX25 | 1e-114 | M7ZX25_TRIUA; Putative WRKY transcription factor 13 | ||||
STRING | TRIUR3_32723-P1 | 1e-114 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1138 | 38 | 130 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39410.1 | 1e-19 | WRKY DNA-binding protein 13 |