PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_31693-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family YABBY
Protein Properties Length: 220aa    MW: 24705.3 Da    PI: 10.0403
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_31693-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY100.15e-314717322162
            YABBY  22 lavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppv 115
                      ++v vP + l+ +vtv+CGhC +l  ++ +    +++ + +            ++  ++ +   +  +++ +++      s  +++ +pr+p v
  TRIUR3_31693-P1  47 FLVGVPCKRLMDTVTVKCGHCNNLSFLSPRPPPMVQPLSPN------------DH--HHPMGPFQGCTDCRRNQPLPPLASPTSSDASPRAPFV 126
                      689*******************9866444444444444443............22..22333334444444433333333566778899***** PP

            YABBY 116 irPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWah 162
                      ++PPek+ r Psaynrf++eeiqrika+ Pdi hreafs+aaknWa 
  TRIUR3_31693-P1 127 VKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAK 173
                      *********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF046902.1E-3747174IPR006780YABBY protein
SuperFamilySSF470952.75E-8119175IPR009071High mobility group box domain
Gene3DG3DSA:1.10.30.102.4E-5128175IPR009071High mobility group box domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010254Biological Processnectary development
GO:0010582Biological Processfloral meristem determinacy
GO:0048479Biological Processstyle development
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MDKSRPYHAV SSQYSTKLNA HMSGQTTQVD LPRVIQSSFS MQLFRWFLVG VPCKRLMDTV  60
TVKCGHCNNL SFLSPRPPPM VQPLSPNDHH HPMGPFQGCT DCRRNQPLPP LASPTSSDAS  120
PRAPFVVKPP EKKHRLPSAY NRFMREEIQR IKAAKPDIPH REAFSMAAKN WAKCDPRCSS  180
TVSASNSAPE PRIVVPGPQE RATEQVVESF DIFKQMERSA
Functional Description ? help Back to Top
Source Description
UniProtRegulates carpel specification in flower development. Severe or intermediate mutation in DL causes complete or partial homeotic conversion of carpels into stamens without affecting the identities of other floral organs. Interacts antagonistically with class B genes and controls floral meristem determinacy. Regulates midrib formation in leaves probably by inducing cell proliferation in the central region of the leaf. {ECO:0000269|PubMed:14729915}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00220DAPTransfer from AT1G69180Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB4702690.0AB470269.1 Triticum aestivum TaDL mRNA for DL related protein, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020156144.11e-122protein DROOPING LEAF-like isoform X1
SwissprotQ76EJ01e-95YABDL_ORYSJ; Protein DROOPING LEAF
TrEMBLM7ZN461e-162M7ZN46_TRIUA; Protein DROOPING LEAF
STRINGTRIUR3_31693-P11e-163(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP59513657
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69180.12e-40YABBY family protein