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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_31678-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bZIP | ||||||||
Protein Properties | Length: 185aa MW: 21006.5 Da PI: 6.0342 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.9 | 8e-12 | 87 | 135 | 3 | 51 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 e +r rr+ +NRe+ArrsR RK++++ +L v L N++L ++l++ TRIUR3_31678-P1 87 EERRRRRMVSNRESARRSRVRKQKQLGQLWAQVVHLRDANRDLLDQLNR 135 56899**************************************988876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 7.2E-8 | 84 | 135 | No hit | No description |
SMART | SM00338 | 1.1E-8 | 84 | 149 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.3E-9 | 87 | 135 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.565 | 87 | 135 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.25E-10 | 89 | 135 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 92 | 107 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 2.37E-12 | 94 | 136 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence Send to blast |
MYPAEVAGVL LPAAYLPPPA NAASLGPHYP YQMEEDDHLL FQCSSSSLMQ LPYADELFLN 60 HPPAVPLRNG SSSDEPAAHA VDRQRAEERR RRRMVSNRES ARRSRVRKQK QLGQLWAQVV 120 HLRDANRDLL DQLNRAIVDY DRVVRDNSRM RDERAELQRR LRELPVVDAG DAEGVAVGED 180 DESTV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 88 | 109 | RRRRRMVSNRESARRSRVRKQK |
2 | 101 | 107 | RRSRVRK |
3 | 101 | 108 | RRSRVRKQ |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00647 | PBM | Transfer from LOC_Os02g49560 | Download |
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Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU730897 | 1e-71 | EU730897.1 Brachypodium distachyon clone BAC DB038O09, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020151961.1 | 1e-106 | basic leucine zipper 8-like | ||||
TrEMBL | M7YWV9 | 1e-129 | M7YWV9_TRIUA; G-box-binding factor 1 | ||||
STRING | TRIUR3_31678-P1 | 1e-130 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 9e-10 | basic leucine-zipper 42 |