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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
TRIUR3_31671-P1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family |
GRAS |
| Protein Properties |
Length: 143aa MW: 15455.6 Da PI: 6.5314 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| TRIUR3_31671-P1 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 113.8 | 2.3e-35 | 2 | 143 | 235 | 374 |
GRAS 235 sPkvvvvveqeadhnse....sFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGF 324
P vv+v+e+ea+ ++ ++ +r+ a+++y a+f++lea++p+ s+er vE+e+lgrei+ +v +g + + le+W + + GF
TRIUR3_31671-P1 2 APAVVTVAEREASGGGIdpidELPRRVGVAMDHYLAVFEALEATVPPGSRERLAVEQEVLGREIEAAVGGAGGR---WWRGLERWATAARGTGF 92
79*********99976556669**********************************************999987...7899************* PP
GRAS 325 kpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
+ pls +a++qa+lllr ++ s+gy v+e++g+ +lgW++rpL+svSaW+
TRIUR3_31671-P1 93 AARPLSAFAVSQARLLLRLHYpSEGYLVQESRGACFLGWQTRPLLSVSAWQ 143
**************************************************6 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 143 aa
Download sequence Send
to blast |
MAPAVVTVAE REASGGGIDP IDELPRRVGV AMDHYLAVFE ALEATVPPGS RERLAVEQEV 60
LGREIEAAVG GAGGRWWRGL ERWATAARGT GFAARPLSAF AVSQARLLLR LHYPSEGYLV 120
QESRGACFLG WQTRPLLSVS AWQ
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Putative transcription regulator that controls rice tillering by initiating axillary buds and promoting their outgrowth. Rice tiller is a specialized grain-bearing branch that is formed on the unelongated basal internode and grows independently of the mother stem (culm) by means of its own adventitious roots. {ECO:0000269|PubMed:12687001}. |
| Publications
? help Back to Top |
- Li X, et al.
Control of tillering in rice.
Nature, 2003. 422(6932): p. 618-21
[PMID:12687001] - Sun F, et al.
Identification and functional analysis of the MOC1 interacting protein 1.
J Genet Genomics, 2010. 37(1): p. 69-77
[PMID:20171579] - Sanyal A, et al.
Orthologous comparisons of the Hd1 region across genera reveal Hd1 gene lability within diploid Oryza species and disruptions to microsynteny in Sorghum.
Mol. Biol. Evol., 2010. 27(11): p. 2487-506
[PMID:20522726] - Yan WH, et al.
A major QTL, Ghd8, plays pleiotropic roles in regulating grain productivity, plant height, and heading date in rice.
Mol Plant, 2011. 4(2): p. 319-30
[PMID:21148627] - Xu C, et al.
Degradation of MONOCULM 1 by APC/C(TAD1) regulates rice tillering.
Nat Commun, 2012. 3: p. 750
[PMID:22434193] - Lin Q, et al.
Rice APC/C(TE) controls tillering by mediating the degradation of MONOCULM 1.
Nat Commun, 2012. 3: p. 752
[PMID:22434195] - Liang WH,Shang F,Lin QT,Lou C,Zhang J
Tillering and panicle branching genes in rice.
Gene, 2014. 537(1): p. 1-5
[PMID:24345551] - Zhang B, et al.
Novel function of a putative MOC1 ortholog associated with spikelet number per spike in common wheat.
Sci Rep, 2015. 5: p. 12211
[PMID:26197925]
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