PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_29732-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 1110aa    MW: 122237 Da    PI: 5.7046
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_29732-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B388.45.7e-282106199
                      EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.S CS
               B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.s 88 
                      f+kv tpsd++k++rlv+pk++ae++     +++ ++  l +ed+ g+ W+++++y+++s++yv+tkGW++Fv++  L++gD+v F++  g+  
  TRIUR3_29732-P1   2 FVKVVTPSDTGKLNRLVIPKQHAEKYfpldASSNDNGLLLDFEDSAGKPWRFRYSYWNSSQSYVMTKGWSRFVRETLLEAGDTVFFSRGvGEaA 95 
                      89***************************9445557889************************************************6658889 PP

                      EE..EEEEE-S CS
               B3  89 efelvvkvfrk 99 
                      +++l++ ++r+
  TRIUR3_29732-P1  96 RGRLFIDWRRR 106
                      9999*999997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd100179.49E-24189No hitNo description
Gene3DG3DSA:2.40.330.107.5E-351105IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019364.19E-26190IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086314.3532107IPR003340B3 DNA binding domain
PfamPF023623.3E-262106IPR003340B3 DNA binding domain
SMARTSM010192.3E-202107IPR003340B3 DNA binding domain
PROSITE profilePS5175222.893142289IPR001229Jacalin-like lectin domain
SuperFamilySSF511019.94E-29145287IPR001229Jacalin-like lectin domain
Gene3DG3DSA:2.100.10.302.4E-29147288IPR001229Jacalin-like lectin domain
SMARTSM009151.6E-4153289IPR001229Jacalin-like lectin domain
CDDcd096124.11E-32157287IPR033734Jacalin-like lectin domain, plant
PfamPF014191.1E-18164288IPR001229Jacalin-like lectin domain
Gene3DG3DSA:2.100.10.306.3E-35301450IPR001229Jacalin-like lectin domain
SuperFamilySSF511011.44E-33302450IPR001229Jacalin-like lectin domain
PROSITE profilePS5175229.608303450IPR001229Jacalin-like lectin domain
SMARTSM009153.1E-6314450IPR001229Jacalin-like lectin domain
CDDcd096125.60E-22314449IPR033734Jacalin-like lectin domain, plant
PfamPF014194.2E-18318450IPR001229Jacalin-like lectin domain
PROSITE profilePS5001117.63400738IPR000719Protein kinase domain
SMARTSM002203.5E-7480831IPR000719Protein kinase domain
Gene3DG3DSA:3.30.200.204.7E-5540587No hitNo description
SuperFamilySSF561121.76E-29561682IPR011009Protein kinase-like domain
PfamPF000691.7E-22585703IPR000719Protein kinase domain
PROSITE patternPS001080587599IPR008271Serine/threonine-protein kinase, active site
Gene3DG3DSA:1.10.510.102.6E-26588688No hitNo description
PROSITE profilePS5020213.86760889IPR000535Major sperm protein (MSP) domain
SuperFamilySSF493542.01E-15775873IPR008962PapD-like
Gene3DG3DSA:2.60.40.3607.2E-15775877IPR008962PapD-like
PfamPF006356.4E-10776865IPR000535Major sperm protein (MSP) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
GO:0030246Molecular Functioncarbohydrate binding
Sequence ? help Back to Top
Protein Sequence    Length: 1110 aa     Download sequence    Send to blast
MFVKVVTPSD TGKLNRLVIP KQHAEKYFPL DASSNDNGLL LDFEDSAGKP WRFRYSYWNS  60
SQSYVMTKGW SRFVRETLLE AGDTVFFSRG VGEAARGRLF IDWRRRRGPD VVLSSPHHRG  120
FTLLSVGSDG FAYPHPNLEG IYYEDRAMGG NRGIFNDIKA SPLRLNSVTI RSGEVIYSLA  180
FSYSDNYEKQ HHAGPWGGCK DFSYGSFDTI QLGPSEFLTE VSGTIAFSAQ YSSNVITSVM  240
FTTTGRQYGP FGGGVGIPFH SPVMSNGSIV GFFAHAEWVV ESIGLYVNSE SKLWEPMKGQ  300
DSVTKIGPWG SDTGRPNDVD VLPGRLISVV VHNSTVINSL TFAYIDWDGQ QQTAGPWGWT  360
PEPFDGKIDT IILGRSEFLT AVSGTLGRNS GYSDVVTSLY FVTNTGGYGP YGKGGGTRFR  420
SSLQGNGSIV GFFVNVRGDE IDAIGVYFSP EMEACKEKEE GGVGISRSMA CRESYHDKNY  480
GKEGVLLITT YASVYELRTE ANLSNYPISL NNMRLESNLI SLGLNMEVHA VIRVEMESAS  540
NVLEHIVLDR SAEPTNLPLA LLKHITEDFN DKRQIGCGGF GIVYKGIVHR DMKPENILLD  600
DLMIPKITDF GISELLDGAT HAVTSDPTGS RGYCAPEFIA RGEVSIRSDI YSLGVIIKEL  660
VTGCKDEPDI QNFHTAQNKA QTPTRMCLVV SESTPSSHVP NNMLIEGTFT FQTCIEEGIT  720
LELMTSRYMD FTENTPFLVL RRWRYRWNKS ANYPPFGYQQ ISAYPWELLE FDLLELNFPF  780
EVNKQIPCPL QLTNVTDDYV AFDIEMMGIL RYCIKPEKRV VPPRSMCNVM VTLQPHERVP  840
HAMVCKDELF ILQCAAVSEG LTAEDIIEDM LNKKSEVGAG ARDMTFTATT NPIDIPYRSR  900
VSAVLTGSST TAVIHSLSSP ATVTMVGTGS SSSGQAEGGA RGAEEGSTSH QRGEKGCSRG  960
AVATPSPAAG GFHLMSCLKD VPTLRDDNHT EWRKKVELAF VCADLDWVLD EPQPVRPTEP  1020
NTIESTIVGS IAASTSVGEL LIKIKSQFTG SSKIYATQVL KQLVIEHYTG GGIREHILRM  1080
SNMAAKLKPM DEDLEIKPKL PGHGFTAKGV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5os9_A1e-5111067113B3 domain-containing transcription factor NGA1
5os9_B1e-5111067113B3 domain-containing transcription factor NGA1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3666011e-115AK366601.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2044K15.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020193609.10.0uncharacterized protein LOC109779403
TrEMBLT1NGI30.0T1NGI3_TRIUA; Uncharacterized protein
STRINGTRIUR3_29732-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2261944
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01030.14e-50B3 family protein