PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_28933-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 292aa    MW: 33112.7 Da    PI: 8.193
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_28933-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.61.5e-50141442128
              NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                       pG+rFhPtdeelv++yL++kv++k+l++ evi+e+diyk++PwdLp +++ ++ekewyfF+ r +ky+++ r+nr+t+sg+Wkatg d++++s
  TRIUR3_28933-P1  14 LPGYRFHPTDEELVTFYLRRKVARKSLRI-EVIREMDIYKHDPWDLPkASTVGGEKEWYFFCLRGRKYRNSIRPNRVTSSGFWKATGIDRPIYS 106
                      69***************************.99***************445556889************************************** PP

              NAM  95 k....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +    +g  vglkk+Lv+y+g+a kg+ktdW+mhe+rl
  TRIUR3_28933-P1 107 AggsgSGVSVGLKKSLVYYRGSAGKGTKTDWMMHEFRL 144
                      977766677***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100554.66913170IPR003441NAC domain
SuperFamilySSF1019419.15E-5613169IPR003441NAC domain
PfamPF023657.1E-2515144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
GGGGDEEDDD DVVLPGYRFH PTDEELVTFY LRRKVARKSL RIEVIREMDI YKHDPWDLPK  60
ASTVGGEKEW YFFCLRGRKY RNSIRPNRVT SSGFWKATGI DRPIYSAGGS GSGVSVGLKK  120
SLVYYRGSAG KGTKTDWMMH EFRLPPAAAT NASPSMQEAE VWTICRIFRR TITYRKQQQP  180
GXRPRPPPAP SIPQQQQQHQ YVSQTSTVDS GNFLYEDNMH NQQFQGEWNA APAAPVPEQK  240
QQNPLSTAVA LHQNDHSHAV AANDFYKVEG YLEEIARMLE VTDSAGLYDY RS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A4e-481517019165NO APICAL MERISTEM PROTEIN
1ut4_B4e-481517019165NO APICAL MERISTEM PROTEIN
1ut7_A4e-481517019165NO APICAL MERISTEM PROTEIN
1ut7_B4e-481517019165NO APICAL MERISTEM PROTEIN
3swm_A4e-481517022168NAC domain-containing protein 19
3swm_B4e-481517022168NAC domain-containing protein 19
3swm_C4e-481517022168NAC domain-containing protein 19
3swm_D4e-481517022168NAC domain-containing protein 19
3swp_A4e-481517022168NAC domain-containing protein 19
3swp_B4e-481517022168NAC domain-containing protein 19
3swp_C4e-481517022168NAC domain-containing protein 19
3swp_D4e-481517022168NAC domain-containing protein 19
4dul_A4e-481517019165NAC domain-containing protein 19
4dul_B4e-481517019165NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269|PubMed:22345491}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269|PubMed:22345491}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3604320.0AK360432.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1118B07.
GenBankAK3747280.0AK374728.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3074N05.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020195561.11e-177transcription factor JUNGBRUNNEN 1-like
SwissprotQ9SK552e-81NAC42_ARATH; Transcription factor JUNGBRUNNEN 1
TrEMBLT1NED30.0T1NED3_TRIUA; Uncharacterized protein
STRINGTRIUR3_28933-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP119138129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.12e-74NAC domain containing protein 42
Publications ? help Back to Top
  1. Shahnejat-Bushehri S,Nobmann B,Devi Allu A,Balazadeh S
    JUB1 suppresses Pseudomonas syringae-induced defense responses through accumulation of DELLA proteins.
    Plant Signal Behav, 2016. 11(6): p. e1181245
    [PMID:27159137]
  2. Shahnejat-Bushehri S,Tarkowska D,Sakuraba Y,Balazadeh S
    Arabidopsis NAC transcription factor JUB1 regulates GA/BR metabolism and signalling.
    Nat Plants, 2016. 2: p. 16013
    [PMID:27249348]
  3. Shahnejat-Bushehri S, et al.
    Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato.
    Front Plant Sci, 2017. 8: p. 214
    [PMID:28326087]
  4. Sakuraba Y,Bülbül S,Piao W,Choi G,Paek NC
    Arabidopsis EARLY FLOWERING3 increases salt tolerance by suppressing salt stress response pathways.
    Plant J., 2017. 92(6): p. 1106-1120
    [PMID:29032592]
  5. Ebrahimian-Motlagh S, et al.
    JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13.
    Front Plant Sci, 2017. 8: p. 2118
    [PMID:29326734]