PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIUR3_28368-P1

Organism

Triticum urartu

Taxonomic ID

4572

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bZIP

Protein Properties

Length: 546aa MW: 59360.9 Da PI: 6.9699

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIUR3_28368-P1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.2	4.8e-10	248	289	3	41
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 + k+ rr+++NReAAr+sR+RKka+i++Le k ++Le+e TRIUR3_28368-P1 248 KEKVMRRLAQNREAARKSRLRKKAYIQQLESsriKLAQLEQE 289 56899************************9722244444444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	8.0E-8	244	294	No hit	No description
SMART	SM00338	5.0E-6	246	306	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.22	248	292	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	5.1E-7	249	289	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.63E-7	250	294	No hit	No description
CDD	cd14708	1.22E-20	250	296	No hit	No description
PROSITE pattern	PS00036	0	253	268	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	1.0E-25	349	424	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009409	Biological Process	response to cold
GO:0042742	Biological Process	defense response to bacterium
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 546 aa Download sequence Send to blast
MELYPGYLED HFNIHKLSRR NPLPEKGFPA PNLHFAPHAT VAVFRTGGAS RIGASPVRAM 60 SLASGKAASS GSRVDSARAD DTARHDEAGH GSVAEFFVKM VRGALGEDEE KGGALCVMAN 120 QEDEEKGGAL CASPTHPSHS QEMSRRSGTG GASPPEYMSS AAAAQYAPAP LRMAMYERAP 180 PPQQHQQPQL QPALGMWSSE PYKVDSGGQA TSGSSIMEPD AKFDHAGLDE DPHMDELETA 240 DQGASKPKEK VMRRLAQNRE AARKSRLRKK AYIQQLESSR IKLAQLEQEL QRTRQQQGMY 300 GGNPGTSLHR GGSAGHLGFA AAGQMMDPGV AAFEIAYGHW VDDQKRNTEE LRSALQPGQG 360 TSELELEVMV QTGLANYDNL FRIKGAAAQA DVFCVMSGLW RSPAERFFLW IGGFRPSEVL 420 KILSPQLQPM SEPQSVAVYA LQLTSAQAED ALSQGMQKLQ QTLAESLTDP FAAPDAYMVG 480 AVEKLKGLVG FVQQADHLRQ ETLQNMHRIL TTRQAAKGLL VLGDYFQRLR ALSTLWAARP 540 RESAIS

Sequence ? help Back to Top

Protein Sequence Length: 546 aa Download sequence Send to blast

MELYPGYLED HFNIHKLSRR NPLPEKGFPA PNLHFAPHAT VAVFRTGGAS RIGASPVRAM  60
SLASGKAASS GSRVDSARAD DTARHDEAGH GSVAEFFVKM VRGALGEDEE KGGALCVMAN  120
QEDEEKGGAL CASPTHPSHS QEMSRRSGTG GASPPEYMSS AAAAQYAPAP LRMAMYERAP  180
PPQQHQQPQL QPALGMWSSE PYKVDSGGQA TSGSSIMEPD AKFDHAGLDE DPHMDELETA  240
DQGASKPKEK VMRRLAQNRE AARKSRLRKK AYIQQLESSR IKLAQLEQEL QRTRQQQGMY  300
GGNPGTSLHR GGSAGHLGFA AAGQMMDPGV AAFEIAYGHW VDDQKRNTEE LRSALQPGQG  360
TSELELEVMV QTGLANYDNL FRIKGAAAQA DVFCVMSGLW RSPAERFFLW IGGFRPSEVL  420
KILSPQLQPM SEPQSVAVYA LQLTSAQAED ALSQGMQKLQ QTLAESLTDP FAAPDAYMVG  480
AVEKLKGLVG FVQQADHLRQ ETLQNMHRIL TTRQAAKGLL VLGDYFQRLR ALSTLWAARP  540
RESAIS

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00502	DAP	Transfer from AT5G10030	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KJ596414	0.0	KJ596414.1 Triticum aestivum transcription factor TGA4 (TGA4) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020166032.1	0.0	transcription factor TGAL6-like isoform X1
Refseq	XP_020166033.1	0.0	transcription factor TGAL6-like isoform X1
Swissprot	A0A0P0WFC8	1e-156	TGAL6_ORYSJ; Transcription factor TGAL6
TrEMBL	M7Y8K7	0.0	M7Y8K7_TRIUA; Transcription factor TGA4
STRING	TRIUR3_28368-P1	0.0	(Triticum urartu)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3571	38	77

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10030.2	1e-106	TGACG motif-binding factor 4

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Okada A, et al. OsTGAP1, a bZIP transcription factor, coordinately regulates the inductive production of diterpenoid phytoalexins in rice. J. Biol. Chem., 2009. 284(39): p. 26510-8 [PMID:19635799] Okada K The biosynthesis of isoprenoids and the mechanisms regulating it in plants. Biosci. Biotechnol. Biochem., 2011. 75(7): p. 1219-25 [PMID:21737944] Yamane H Biosynthesis of phytoalexins and regulatory mechanisms of it in rice. Biosci. Biotechnol. Biochem., 2013. 77(6): p. 1141-8 [PMID:23748776] Miyamoto K, et al. Identification of target genes of the bZIP transcription factor OsTGAP1, whose overexpression causes elicitor-induced hyperaccumulation of diterpenoid phytoalexins in rice cells. PLoS ONE, 2014. 9(8): p. e105823 [PMID:25157897] Miyamoto K, et al. Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells. J. Plant Physiol., 2015. 173: p. 19-27 [PMID:25462074]