PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_28246-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 980aa    MW: 111565 Da    PI: 6.4303
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_28246-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY67.71.7e-21902962259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                      +Dg+nWrK+GqK++++s+f r YYrC++    +Cpv k+++r++ dp +++++Y+ eH+++
  TRIUR3_28246-P1 902 SDGFNWRKFGQKTIHDSNFRRDYYRCAHYrshKCPVIKHMQRTDADPLLFQVVYRHEHTCT 962
                      7**************************97788**************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd147982.05E-299138No hitNo description
SuperFamilySSF525407.43E-56160438IPR027417P-loop containing nucleoside triphosphate hydrolase
Gene3DG3DSA:3.40.50.3001.6E-15194352IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF009312.1E-57194465IPR002182NB-ARC
PRINTSPR003644.2E-15198213No hitNo description
PRINTSPR003644.2E-15274288No hitNo description
PRINTSPR003644.2E-15371385No hitNo description
SuperFamilySSF520582.04E-27502850IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.101.6E-20566837IPR032675Leucine-rich repeat domain, L domain-like
PRINTSPR003644.2E-15597613No hitNo description
PROSITE profilePS5081118.337896964IPR003657WRKY domain
SuperFamilySSF1182906.8E-20900963IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.5E-21900962IPR003657WRKY domain
SMARTSM007746.8E-25901963IPR003657WRKY domain
PfamPF031061.0E-19903961IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043531Molecular FunctionADP binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 980 aa     Download sequence    Send to blast
MEAAVVSVSH GAIGFVIAKL GDLLAGKYKL LKQAKGEIMF LKAELESMRA FLERMSEAEE  60
EPDKQARCWA NEVRDLSYDI EDSVDEFMLL VEGESNGEPH GFKGFIHRSM NLLTTMNTRQ  120
KVAKEFQDLK SRVMEVSERR MRYKIDDAVS KPNNTTIDIR MLALYADTSG LVGIDGLRDE  180
LIHLMVGEEG VSAQQRKVLS IVGFGGLGNT TLANQIYHRL KWQYECQAFV SVSQKPNIRM  240
ILRRMLSQVG YVALEGTNME IWAEDELISA LRQFLMDKRY LIVIDDVWDE TTWNVIRCAL  300
PKNLDGSMII TTTRINTVAR ACCCNQHDYV YKMKSLSNED SRKLFFNRVF GSEEACPLYL  360
EEVSAQILKR CAGLPLAIVI ISSLLASEQN TLKENWVHIK NSLGPNFEVN PTLEGMRQIL  420
SLSYINLPHY LKTCMLYLGM YPEDYIIWKN DLVRQWIAQG FLSKVHGQYP EAIAEGYFNE  480
LVNRGIIQPV DTDHNNEVLS CKVHDMILDL IVHKCRDENF IIATHDIQAM IGLSGKVRRL  540
SLYLDGIIDG TILETAQLSQ WKPWVEIPDL TGISHLFHLR YLKIEADGEI VLPRKIRGLE  600
QLETLELGAC PLEVPQDVIH LRRLQHLIIP SGINLPDGIG NMKSVCTLQE FDVGLNSIDS  660
IRGLGELTNL RNLRICYYMD ELHDRKTTQR LDVLRCSLEK LCNLRYLHTD SNINSIYALS  720
SHVSLCLLRR LHMLCMFPMI PKWIGELHNL TDLDLRVEVL EDDIVILAQL QSLNHLKLHV  780
EGTCEAKEKV VICGIGFPIL KHFRLSCIRI SQLTFEAGAM PSLEKLEVRL NFLYGGAPMG  840
IEYLLGLKEI LVIVGGYGAE GSTTRAAVSA LREAIDMRSS RPTADITCVD NSMFFGLLSL  900
SSDGFNWRKF GQKTIHDSNF RRDYYRCAHY RSHKCPVIKH MQRTDADPLL FQVVYRHEHT  960
CTTQSMFPLP QPGNEEIVDL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j5t_C5e-5517971839Disease resistance RPP13-like protein 4
6j5t_F5e-5517971839Disease resistance RPP13-like protein 4
6j5t_G5e-5517971839Disease resistance RPP13-like protein 4
6j5t_L5e-5517971839Disease resistance RPP13-like protein 4
6j5t_O5e-5517971839Disease resistance RPP13-like protein 4
6j5u_A5e-5517971839Disease resistance RPP13-like protein 4
6j5v_A5e-5517971839Disease resistance RPP13-like protein 4
6j5w_A5e-5517971839Disease resistance RPP13-like protein 4
6j6i_C5e-5517971839Disease resistance RPP13-like protein 4
6j6i_F5e-5517971839Disease resistance RPP13-like protein 4
6j6i_G5e-5517971839Disease resistance RPP13-like protein 4
6j6i_L5e-5517971839Disease resistance RPP13-like protein 4
6j6i_O5e-5517971839Disease resistance RPP13-like protein 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020193469.10.0putative disease resistance RPP13-like protein 3
TrEMBLM7YD700.0M7YD70_TRIUA; Disease resistance protein RPM1
STRINGTRIUR3_28246-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP558
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.15e-16WRKY DNA-binding protein 55