 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
TRIUR3_27720-P1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
| Family |
LBD |
| Protein Properties |
Length: 182aa MW: 19370.7 Da PI: 4.6059 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| TRIUR3_27720-P1 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 49.7 | 1.1e-15 | 56 | 109 | 46 | 99 |
DUF260 46 lkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99
k+lpe+ r da+ss+vyeAear+rdPvyG++g++ +lq++ ++lk++la++++
TRIUR3_27720-P1 56 CKDLPESSRADAVSSMVYEAEARLRDPVYGCAGTVCRLQKEANELKVDLARARA 109
57899********************************************99987 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 182 aa
Download sequence Send
to blast |
MDYSNEATIT AAAQPYGRSM SPPSRVSSCS PPPVFPLMGN APSSPPTIVL SPGAACKDLP 60
ESSRADAVSS MVYEAEARLR DPVYGCAGTV CRLQKEANEL KVDLARARAD LLSIQAQHAN 120
LLALVCVEFA ANHRGDQQLH QPPPLGDQLN GIGGSGGGAM YQPLYDSDFD SAPWEEARQL 180
WT
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC137074 | 1e-59 | AC137074.2 Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0022M22, from chromosome 3, complete sequence. |
| GenBank | AP014959 | 1e-59 | AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012611 | 1e-59 | CP012611.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence. |
