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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_26921-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 212aa MW: 22913.1 Da PI: 9.7492 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.3 | 3.1e-09 | 33 | 82 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ E+ RR+r+N ++L +l+Pk ++++ ++ L A YIk+L TRIUR3_26921-P1 33 KKDSEKERRQRMNGLCDKLASLIPKEHNPHADTMTQLGSLDVAASYIKML 82 5778*********************75777777***************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 10.544 | 28 | 82 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 7.26E-6 | 33 | 86 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 1.1E-11 | 33 | 97 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 7.4E-7 | 33 | 82 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 7.0E-6 | 34 | 88 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.31E-10 | 35 | 100 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence Send to blast |
MAVTAKPARG GKRTRASSGA AGATATTAVL TEKKDSEKER RQRMNGLCDK LASLIPKEHN 60 PHADTMTQLG SLDVAASYIK MLKERVDELQ HKKTSAQAMA TLQGVSGISI PSTTSSGAGS 120 PEREKYLEAS APVVQVRRTD DSSMEVRMIC STEKPIKLHE VITILEEEGA DIINANHSVV 180 GHKIFYTIHF RAFSNRIGID DSRISGRLGA LV |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020190835.1 | 1e-116 | uncharacterized protein LOC109776586 | ||||
TrEMBL | M7XLV9 | 1e-154 | M7XLV9_TRIUA; Uncharacterized protein | ||||
STRING | TRIUR3_26921-P1 | 1e-155 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP829 | 36 | 133 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10585.1 | 9e-15 | bHLH family protein |