 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
TRIUR3_26324-P1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 213aa MW: 23649.2 Da PI: 4.8382 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| TRIUR3_26324-P1 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 40.9 | 3.5e-13 | 64 | 110 | 5 | 51 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHH CS
Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNr 51
+++ eq+++Le+ Fe +++++ e+++++A+ lgL rq vWFqNr
TRIUR3_26324-P1 64 RRLALEQVRALERSFETDNKLDPERKARIARDLGLHPRQGAVWFQNR 110
467789****************************************9 PP
|
| 2 | HD-ZIP_I/II | 83.9 | 2.2e-27 | 62 | 157 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrR.ARtktkql....EkdyeaLkraydalkeenerLekeveeLree 90
kkrrl+ eqv++LE+sFe+++kL+perK+++ar+Lgl+prq avWFqnr t++ ++ ++aL++ +dal++++++L +e +eLre+
TRIUR3_26324-P1 62 KKRRLALEQVRALERSFETDNKLDPERKARIARDLGLHPRQGAVWFQNRFlTATQLGRVssapRARHDALRADCDALRRDKDALAAEIHELREK 155
9***********************************************9622334434311113467788888888888888888888888887 PP
HD-ZIP_I/II 91 lk 92
l+
TRIUR3_26324-P1 156 LS 157
75 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 213 aa
Download sequence Send
to blast |
MKRQIKRPTR SQESPEPGEK LAFAEKENLL AAYMEHDEPE LEEADEEEEE EERAMSCGLG 60
GKKRRLALEQ VRALERSFET DNKLDPERKA RIARDLGLHP RQGAVWFQNR FLTATQLGRV 120
SSAPRARHDA LRADCDALRR DKDALAAEIH ELREKLSTKP ETSVKAEAAG NADAAEERLQ 180
QATMIGAAVC KDGSSDSDSS AVFNDEASPY SGA
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK353965 | 0.0 | AK353965.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1004B20. |
