PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_25578-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 377aa    MW: 40884.4 Da    PI: 5.7246
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_25578-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.89.8e-13294336648
                      HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                      r  r++kNRe+A  sR RK+a+++eLe +   L++eN++Lk +
  TRIUR3_25578-P1 294 RHHRMIKNRESAAQSRGRKQAYTKELEAELNHLKEENSRLKAK 336
                      567**********************************999865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.9E-9289355IPR004827Basic-leucine zipper domain
CDDcd147077.05E-23294346No hitNo description
Gene3DG3DSA:1.20.5.1706.8E-12294337No hitNo description
PROSITE profilePS502179.599294336IPR004827Basic-leucine zipper domain
PfamPF001703.4E-10294336IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.06E-9294339No hitNo description
PROSITE patternPS000360297311IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
SKDVNFSEEE VTSHPRVLEC EEQTVAPARQ SSIFAPMLDE LQYSMCEAGH NFGSMNMDKF  60
MSNIWNDKEF QEATGGVLVG MEVASVVGAD GGRGGEDAGG SNLARQESFS LPPPLCRKMG  120
EEVWAEINRE TRPVHSQPQS ARPSPLIPVE PPAGNGGGVA ANEQRGTLGE MTLEQFLVKV  180
GVVRGSGTGG QAPVPVGMVH GQMNPAPAND MFQVMGDGMV FIPNGYAGMV VVPLPPPPQG  240
GVGIVSLGSS DGRSTMMEVD MMNYMGDRTM MENSGARKRG APEDQSCEGS IECRHHRMIK  300
NRESAAQSRG RKQAYTKELE AELNHLKEEN SRLKAKEKMI LLTKKQIVLE RMMEQSKENV  360
NAKKGGALSR RCSSCIW
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that possesses transactivation activity in yeast (PubMed:17604002, PubMed:21055780, PubMed:18236009). Involved in abscisic acid (ABA) signaling pathway. Binds to the G-box motif 5'-CACGTG-3' of TRAB1 gene promoter (PubMed:17604002). Involved in the regulation of pollen maturation. May act as negative regulator of salt stress response (PubMed:18236009). Together with PYL5, PP2C30 and SAPK2, is part of an ABA signaling unit that modulates seed germination and early seedling growth (PubMed:22071266). {ECO:0000269|PubMed:17604002, ECO:0000269|PubMed:18236009, ECO:0000269|PubMed:21055780, ECO:0000269|PubMed:22071266}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by abscisic acid (ABA) (PubMed:21055780, PubMed:18236009, PubMed:22071266). Induced by salt stress. Down-regulated by cold and drought stresses (PubMed:18236009). {ECO:0000269|PubMed:18236009, ECO:0000269|PubMed:21055780, ECO:0000269|PubMed:22071266}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB2389321e-162AB238932.1 Triticum aestivum TaABI5 mRNA for bZip type transcription factor TaABI5, complete cds.
GenBankAF5198031e-162AF519803.1 Triticum aestivum ABA response element binding factor (ABFA) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020182640.10.0protein ABSCISIC ACID-INSENSITIVE 5-like
SwissprotQ8RZ351e-121ABI5_ORYSJ; bZIP transcription factor ABI5 homolog
TrEMBLT1N5890.0T1N589_TRIUA; Uncharacterized protein
STRINGTRIUR3_25578-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38303558
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.13e-25ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Zou M,Guan Y,Ren H,Zhang F,Chen F
    A bZIP transcription factor, OsABI5, is involved in rice fertility and stress tolerance.
    Plant Mol. Biol., 2008. 66(6): p. 675-83
    [PMID:18236009]
  2. Kim H, et al.
    A rice orthologue of the ABA receptor, OsPYL/RCAR5, is a positive regulator of the ABA signal transduction pathway in seed germination and early seedling growth.
    J. Exp. Bot., 2012. 63(2): p. 1013-24
    [PMID:22071266]
  3. Bhatnagar N, et al.
    The protein phosphatase 2C clade A protein OsPP2C51 positively regulates seed germination by directly inactivating OsbZIP10.
    Plant Mol. Biol., 2017. 93(4-5): p. 389-401
    [PMID:28000033]