PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_24021-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 204aa    MW: 22379.8 Da    PI: 7.4984
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_24021-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY59.94.9e-1992142158
                      ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                      ldDgy+WrKYG+K+vk+s++p       s+gC+vkk+ver+++d+++v++tY g Hnh
  TRIUR3_24021-P1  92 LDDGYRWRKYGKKMVKNSPNP-------SEGCRVKKRVERDRDDERFVITTYDGVHNH 142
                      59*******************.......68**************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.9E-2279143IPR003657WRKY domain
SuperFamilySSF1182901.83E-1885143IPR003657WRKY domain
PROSITE profilePS5081123.39987145IPR003657WRKY domain
SMARTSM007741.1E-2392144IPR003657WRKY domain
PfamPF031067.6E-1493142IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009867Biological Processjasmonic acid mediated signaling pathway
GO:0050832Biological Processdefense response to fungus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MAAAANYLSS FCFDFGEEYY SLAEAATASY PLHAQQQQQP PTQADSHHSG KAASTTSSSQ  60
GLDNINTSLT SSDARSKGSK IAFKTRSEVE VLDDGYRWRK YGKKMVKNSP NPSEGCRVKK  120
RVERDRDDER FVITTYDGVH NHLAPLPPRG CAGYSLSLAQ TRVDEGASPL PVQGRRCFLD  180
TMKMQAAEGE STTEAFYVIL ATPP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A5e-1882145777Probable WRKY transcription factor 4
2lex_A5e-1882145777Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKR8274030.0KR827403.1 Triticum aestivum WRKY52 transcriptional factor mRNA, complete cds.
GenBankKT7289100.0KT728910.1 Triticum aestivum clone LKc002 WRKY protein mRNA, partial cds.
GenBankKT8658770.0KT865877.1 Triticum aestivum clone KL04 WRKY mRNA, partial cds.
GenBankKT8658780.0KT865878.1 Triticum aestivum clone KL05 WRKY mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003566817.14e-52probable WRKY transcription factor 75
TrEMBLM7YRN41e-152M7YRN4_TRIUA; Putative WRKY transcription factor 50
STRINGTRIUR3_24021-P11e-152(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44137206
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.11e-22WRKY DNA-binding protein 50