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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
TRIUR3_23300-P1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
| Family |
GRAS |
| Protein Properties |
Length: 420aa MW: 47495.8 Da PI: 7.0842 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| TRIUR3_23300-P1 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 268.4 | 2.3e-82 | 1 | 412 | 5 | 374 |
GRAS 5 LlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalklfsevsPilkfshlt 97
L+ec +v +g++e++++ L ++++las + p+qRl ++ La+rl+ ++ ++al ps+ +++ +a++ f +sP+l + +t
TRIUR3_23300-P1 1 LYECMAHVIEGSFEKTDRSLRKIRKLASLVDGPLQRLSMIIADSLARRLLCPIQGFAAALiDPSRYL--EQACLRSARENFASISPYLSTGLVT 92
789************************************************8888887774444443..46666678888************** PP
GRAS 98 aNqaIleavegeervHiiDfdis..qGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl 189
N+a+le v+ ++ v i+D++ s ++ QW+ +l+ + Rp+gpp+lR+T+v++ ++e l +++ L + A++l++ f f+ v +le+l
TRIUR3_23300-P1 93 INRAMLEQVQDQKVVRIVDLSCSttHPWQWLKILHDFHGRPGGPPELRLTVVHE----DSEFLDNMQALLCRQAANLKLCFYFDK-VIGKLETL 181
********************8643389***************************....9**************************.68889999 PP
GRAS 190 eleeL....rvkpgEalaVnlvlqlhrll...........................................desvsleserdevLklvkslsP 236
+++++ +++ gEa++++++lq+hrll + + +++s ++L++++ l+P
TRIUR3_23300-P1 182 DFSNIreilKINFGEAVVISCALQMHRLLavddsvsrdgiaqlqqmanmarlkqmacsacspastlnypqtpSPQRQIPSLLVSFLSAIRALEP 275
8887733336666********************************************************998667777778899********** PP
GRAS 237 kvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvpls 330
k++v++eq+adhn++ F +rf+++++yy+alfdsl+a ++s +r+ vEr+llg+ei+n++ ceg +r erhe+l++W++ ++++ vpls
TRIUR3_23300-P1 276 KIIVMMEQDADHNAPLFHDRFTKTVDYYAALFDSLNAV-DSASPQRARVERVLLGEEIKNILVCEGVQRLERHEKLSQWEMHMQRCEVDHVPLS 368
***********************************887.7999*************************************************** PP
GRAS 331 ekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+a + k l ++ + + +e+++ l+l+W +L+s+SaWr
TRIUR3_23300-P1 369 FEAIREGKERLMSYGLKQCKSDEDNADLLLCWGATRLYSISAWR 412
***************888*************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 420 aa
Download sequence Send
to blast |
LYECMAHVIE GSFEKTDRSL RKIRKLASLV DGPLQRLSMI IADSLARRLL CPIQGFAAAL 60
IDPSRYLEQA CLRSARENFA SISPYLSTGL VTINRAMLEQ VQDQKVVRIV DLSCSTTHPW 120
QWLKILHDFH GRPGGPPELR LTVVHEDSEF LDNMQALLCR QAANLKLCFY FDKVIGKLET 180
LDFSNIREIL KINFGEAVVI SCALQMHRLL AVDDSVSRDG IAQLQQMANM ARLKQMACSA 240
CSPASTLNYP QTPSPQRQIP SLLVSFLSAI RALEPKIIVM MEQDADHNAP LFHDRFTKTV 300
DYYAALFDSL NAVDSASPQR ARVERVLLGE EIKNILVCEG VQRLERHEKL SQWEMHMQRC 360
EVDHVPLSFE AIREGKERLM SYGLKQCKSD EDNADLLLCW GATRLYSISA WRPHSSNAAP
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK375919 | 0.0 | AK375919.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv3109N01. |
