PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_22435-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 308aa    MW: 34091.4 Da    PI: 6.1696
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_22435-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.83e-102450733
                     HHCHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  7 errkqkNReAArrsRqRKkaeieeLee 33
                      rr+++NReAArrsR+RKka++++Le 
  TRIUR3_22435-P1 24 LRRLAQNREAARRSRLRKKAYVQQLES 50
                     69***********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.9E-81565No hitNo description
SMARTSM003381.2E-51881IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.6232064IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.38E-72464No hitNo description
PfamPF001702.4E-72451IPR004827Basic-leucine zipper domain
PROSITE patternPS0003602540IPR004827Basic-leucine zipper domain
PfamPF141441.4E-28105180IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MDCASPGGTD TSTDPDLDKN QATLRRLAQN REAARRSRLR KKAYVQQLES SGLRLAHLEQ  60
ELQRARQQGF LVSTLGDQPD SENGDGASSF YVEYARWLEE HHKQADELRA AVSAHAGDGD  120
LQAIVDTVMA RCDEIFRLKG ATAKADAFRV LSGTWTTPVE RCFLWFGGFR PSELLKLLAS  180
RLEPLTEKQL DSIDVLRRSS LQAEEVLSRE MEALRQSVTE TVAAAGSSSQ SCSDDDCTGQ  240
MAAAVGKLGA MEGLLRQADD LRLRILEETR RVLTIRQCAR AVLVVSDYFS RMRALSSLWI  300
ARPTTGVN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13440RRSRLRK
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3671720.0AK367172.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2052H03.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020175059.10.0transcription factor TGA2.3-like
SwissprotQ6IVC21e-129TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBLM8A0U90.0M8A0U9_TRIUA; Transcription factor HBP-1b(C1)
STRINGTRIUR3_22435-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2086457
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-120bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]