PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_21807-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 272aa    MW: 29201.1 Da    PI: 8.7058
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_21807-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.66.2e-1084129454
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       h+e+ErrRR riN  +  Lr+++P       k ++Ka+ L ++v+ +++L
  TRIUR3_21807-P1  84 VHSEAERRRRVRINAHLTALRRMIPDT-----KQMDKAALLARVVDQVRQL 129
                      59************************9.....67************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.99280129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-1283142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.03E-1384154IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.1E-884129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.04E-1085131No hitNo description
SMARTSM003532.3E-986135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2608.0E-4172214No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MASIGKLSGL SLNSVNEVAV SKSWMAAPGQ SPHDACDHTV SRGPALLPRQ ASSAPPAGPP  60
ELSTTSSSTT GSGRTAPEAR ALKVHSEAER RRRVRINAHL TALRRMIPDT KQMDKAALLA  120
RVVDQVRQLK RRASEAAQQT PAVPPETDEV SVEFCCTGDT DDDDSRLYIK ASVSCDDRPD  180
LVAGFIQALH GLRLRTLRAE VSSLGGRVQH VFTLCKEEEG SAGCAGLNSL KEAVRFALAK  240
VASSELVCGG SPFQFQSKRQ RILESHYSIM SI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703061e-104HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020191744.11e-154putative transcription factor bHLH107 isoform X1
TrEMBLM7Z4280.0M7Z428_TRIUA; Transcription factor bHLH51
STRINGTRIUR3_21807-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33473678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.12e-35bHLH family protein