PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_20135-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 545aa    MW: 60552.8 Da    PI: 4.6765
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_20135-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like47.63.7e-1568116351
          G2-like   3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkg..LtlehvkSHLQ 51 
                      r  W++eLHe+F++ave LG  e At  +i + m+ k+  Lt++hv+SHLQ
  TRIUR3_20135-P1  68 RFTWSSELHEKFLQAVEVLG--ESATAGKIHQYMNAKDlnLTRQHVASHLQ 116
                      899****************4..679***********973369********* PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.8E-1367116IPR009057Homeodomain-like
SuperFamilySSF466896.81E-867116IPR009057Homeodomain-like
TIGRFAMsTIGR015575.8E-1368117IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 545 aa     Download sequence    Send to blast
MCAYDEAVSA RMTLGTCFNV VKPLDTETIN VLRMRALQHR SIKNHKSETE DEEQDALDAN  60
VYSDNLGRFT WSSELHEKFL QAVEVLGESA TAGKIHQYMN AKDLNLTRQH VASHLQVGDG  120
FSLSATVVLP VHQYAAYESF YQLMCSLTYS DWVKGKKKKH MYMDVLYLRQ YLVKHRLRAQ  180
RLSQGYQHYA SMKELSEMIS SSYKLASAKP NNYLATTQTQ FTHGVASSIW DKYPGIVWPH  240
VEGSSAASAM WYKYPGKPWG QVGESSARAE VSQINAGPPS VLIHGTKSIW DRYEESLQYY  300
NGSLANKCEV LPVKSKTLDV YGCNIFINLE RGETSRTEAA GKIVIGLESD DMHEGSMDNV  360
HAAVTPQKDT MEKVRAAVTL QKDAMDEVHA AAIPHGVKEV PAAAMGAGDL MDLGSEALLD  420
GMDNYHPSAE NAQSEPFSDS DWDELEKFWM NQMEGQGQEQ QGLVPLDLLL VDGIAPDELL  480
QEDEAWNQAL QPANPANIVN NTPIAEEPAT GDALVYDLAN QSGVADNVFW VWSPQFAGDD  540
YGMPF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020157230.10.0uncharacterized protein LOC109742549 isoform X1
RefseqXP_020157231.10.0uncharacterized protein LOC109742549 isoform X1
RefseqXP_020157232.10.0uncharacterized protein LOC109742549 isoform X1
RefseqXP_020157233.10.0uncharacterized protein LOC109742549 isoform X1
RefseqXP_020157234.10.0uncharacterized protein LOC109742549 isoform X2
RefseqXP_020157235.10.0uncharacterized protein LOC109742549 isoform X3
RefseqXP_020157236.10.0uncharacterized protein LOC109742549 isoform X3
RefseqXP_020157237.10.0uncharacterized protein LOC109742549 isoform X3
TrEMBLM7Z7Q80.0M7Z7Q8_TRIUA; Uncharacterized protein
STRINGTRIUR3_20135-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP130171928
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.21e-07response regulator 1