PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_19907-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bZIP | ||||||||
Protein Properties | Length: 187aa MW: 20643.8 Da PI: 6.8035 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.4 | 2.1e-10 | 62 | 100 | 4 | 42 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 kr +r NR +A+rsR RK+++i eLe+ v +L++e TRIUR3_19907-P1 62 PKRVKRILANRQSAQRSRVRKLQYISELERCVTTLQNEV 100 5999*******************************9996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.1E-14 | 59 | 123 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.53 | 61 | 113 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.73E-11 | 63 | 117 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.1E-11 | 63 | 117 | No hit | No description |
Pfam | PF00170 | 1.1E-9 | 63 | 108 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 6.82E-24 | 64 | 115 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 66 | 81 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009555 | Biological Process | pollen development | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence Send to blast |
MSMFPDEGGS TAPGSENGTS DSDGDKHGKD RYDDGHNDDA NPEEPGPGHA TPTSSTETIR 60 DPKRVKRILA NRQSAQRSRV RKLQYISELE RCVTTLQNEV SVLSPRVAFL DQQRTILTVG 120 NSHLKQRIAA LAQDKLFKDA HQEALKEEIE RLRQVYQQQN LRMSSGAGAA SDHGGPPPVR 180 AEKELMS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription regulator. {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020195077.1 | 1e-134 | basic leucine zipper 6-like | ||||
Swissprot | Q5JMK6 | 2e-88 | BZP06_ORYSJ; Basic leucine zipper 6 | ||||
TrEMBL | M7ZPW0 | 1e-136 | M7ZPW0_TRIUA; Transcription factor VIP1 | ||||
STRING | TRIUR3_19907-P1 | 1e-136 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1322 | 38 | 125 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58120.1 | 5e-57 | bZIP family protein |
Publications ? help Back to Top | |||
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