PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIUR3_18158-P1

Organism

Triticum urartu

Taxonomic ID

4572

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 309aa MW: 33584.2 Da PI: 9.58

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIUR3_18158-P1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	73	4.3e-23	20	85	2	54
G2-like 2 prlrWtpeLHerFveaveqLGGsek.............AtPktilelmkvkgLtlehvkSHLQkYR 54 pr++Wt eLH++F++a+e LGG++k AtPk +l++m+vk Lt++hvkSHLQ+YR TRIUR3_18158-P1 20 PRMQWTAELHRSFLQAIECLGGEHKsrlivtwallisdATPKLVLQVMGVKELTISHVKSHLQMYR 85 8*******************98766666666666669************************* PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	2.8E-25	16	85	IPR009057	Homeodomain-like
SuperFamily	SSF46689	5.38E-12	17	85	IPR009057	Homeodomain-like
Pfam	PF00249	1.8E-5	21	85	IPR001005	SANT/Myb domain
TIGRFAMs	TIGR01557	7.7E-10	57	85	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence Send to blast
MGSSGKKQEA VRRYVRSRAP RMQWTAELHR SFLQAIECLG GEHKSRLIVT WALLISDATP 60 KLVLQVMGVK ELTISHVKSH LQMYRGPSTR KAKKETEPQL LQRRHSCAAD EQQGGGGPNA 120 PFMCPPLKRA RTTGTEAADK GMQGGQSQGI SGTKTSGAVN RYCIDDYYYM QAMAMERRIM 180 EGLSCQRDAA AAVSSLRTVG CLEQGSGDFK IIKPEAQYYP GLAVKKQDPK EKPKEKDSNG 240 AEQCSLSLSL GPDPRCLRAV SSSSPSEGSC IISSSSSPPR RRRSSSHCSG HSGCFDAQGV 300 NLELSLSIC

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020185290.1	1e-139	putative Myb family transcription factor At1g14600
TrEMBL	T1MK39	0.0	T1MK39_TRIUA; Uncharacterized protein
STRING	TRIUR3_18158-P1	0.0	(Triticum urartu)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2966	35	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	1e-24	G2-like family protein