PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_17056-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 325aa    MW: 34693.7 Da    PI: 8.5054
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_17056-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like23.51.2e-072562743351
          G2-like  33 lelmkvkgLtlehvkSHLQ 51 
                      +e+mkv+gLt+++vkSHLQ
  TRIUR3_17056-P1 256 REMMKVDGLTNDEVKSHLQ 274
                      69****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.0E-5257274IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MGSSAVHKEA VVLGGGGGAG EDHRLRALAA RTVTDSLRAA VARSSSAEKA ARLEECARSL  60
EAEKAKMEVF RRELPISVHL IADVIEWLKN EVAQHRRPAP DQLLAPVPLP SPSPAPLAKR  120
KAEGVKTEAD ASDKRSWMSS AQLWTCGSHS STSNSNGDSV KKHAQKVSNA FMPLNGFPTF  180
AKSSERPEAA AMAVPELSLS SPAIDAPCPA APSADSSAVT DAGAQREQQS AQRKARRCWS  240
PELHRRRAPA PRWPAREMMK VDGLTNDEVK SHLQGPLQLT VSSRGRWVTA GDSCDGGEEN  300
EEEDGKSASY SWGMQQNGTK ASSSS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3757600.0AK375760.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv3103I10.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020151221.11e-172myb family transcription factor EFM-like
TrEMBLM7ZNR10.0M7ZNR1_TRIUA; Uncharacterized protein
STRINGTRIUR3_17056-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP55823353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.14e-14G2-like family protein