PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_17030-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 561aa    MW: 63559.4 Da    PI: 8.897
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_17030-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.33.7e-101492251690
                      EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
               B3  16 lvlpkkfaeehggkkeesktltled.esgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                       ++++kfa++   +k+++  ++l+   + ++W  ++++    + +++ ++ +GWkeFvk+ ++++ D+++F+l++++e+
  TRIUR3_17030-P1 149 KTFSNKFASAWLPNKKSQ--IVLQVeGKTKTWPTNFKVegvGRPDKKSWIYSGWKEFVKDINMNVEDVCLFELKEKKER 225
                      466788887774444344..5555524669999999888863334447899*********************9876444 PP
2B3361.2e-114735571699
                      EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
               B3  16 lvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       + p +f++e+  +  ++++++    + +g+ W  k+ + ++ ++ ++++GW+eF  +ngLk+gD+++F+ +++ ++ l v+++r+
  TRIUR3_17030-P1 473 RTYPVTFCREFasEWLPARKIKNY-LQVEGKAWCTKFDVGRGARMSWIRDGWEEFGWENGLKVGDVCLFEAKKKYGRMLIVHLIRS 557
                      455888888886633334444444.4569********88888899*************************9888888888888875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508638.854134236IPR003340B3 DNA binding domain
SMARTSM010190.0084138228IPR003340B3 DNA binding domain
PfamPF023626.5E-8147225IPR003340B3 DNA binding domain
SuperFamilySSF1019361.96E-10150224IPR015300DNA-binding pseudobarrel domain
CDDcd100177.05E-9150225No hitNo description
Gene3DG3DSA:2.40.330.103.3E-12151224IPR015300DNA-binding pseudobarrel domain
SMARTSM010190.51264358IPR003340B3 DNA binding domain
CDDcd100172.22E-6293356No hitNo description
SuperFamilySSF1019361.12E-8305359IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.1E-8308364IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508638.388322358IPR003340B3 DNA binding domain
SuperFamilySSF1019362.55E-10448556IPR015300DNA-binding pseudobarrel domain
CDDcd100177.77E-10451556No hitNo description
SMARTSM010190.0039460558IPR003340B3 DNA binding domain
PfamPF023628.2E-10473557IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.104.0E-10477556IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086310.236493558IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 561 aa     Download sequence    Send to blast
MSLSSAKAEY RGIANTAAES CWLRQLLTER CRPPPRATVV YCENVSAMYM SGNPVQDQRA  60
APSTSRSISS PLASASLLMR RTYFLSLRAH HIVCFLGHEA QKANDQPSMN LEDCLPPLSN  120
HFGGPSQHTY ILDKTATLPT PMKKRVEEKT FSNKFASAWL PNKKSQIVLQ VEGKTKTWPT  180
NFKVEGVGRP DKKSWIYSGW KEFVKDINMN VEDVCLFELK EKKERRMPPA SMPNRQGSCV  240
GSIATMHAWE RFQVSGDRPR RVRDVGADVH PRGRRRRPSM RREFGSHLEN IAPETEFVKI  300
IARDGVFDFE VIRDDYEPFL SSDGWEEFVD ATNIQEGDSV LFVDRGNFCF KAHIFNPSGH  360
EKSFFFCQRP TEIFGDVPSS TLSDQRVMNG HEAHKANDQP SMNLEDGSPP LSNHVGGPSQ  420
HTSILAQGAT LSTQMKKRVE EKVQAIGSEI PVYVKEMTEI SIIGSKGKGR GCRTYPVTFC  480
REFASEWLPA RKIKNYLQVE GKAWCTKFDV GRGARMSWIR DGWEEFGWEN GLKVGDVCLF  540
EAKKKYGRML IVHLIRSEME V
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLT1MH220.0T1MH22_TRIUA; Uncharacterized protein
STRINGTRIUR3_17030-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP29012985