PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_16094-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 343aa    MW: 38370.4 Da    PI: 7.98
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_16094-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.53.8e-1064104646
                      HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                      + rr+++NReAAr+sR+RKka++++Le    +L +  ++L+
  TRIUR3_16094-P1  64 VLRRLAQNREAARKSRLRKKAYVQQLESSKLKLASLEQELQ 104
                      569************************86666666555554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.7E-758122IPR004827Basic-leucine zipper domain
PfamPF001705.9E-765104IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.25E-765106No hitNo description
Gene3DG3DSA:1.20.5.1706.6E-866108No hitNo description
PROSITE profilePS502178.6866105IPR004827Basic-leucine zipper domain
PROSITE patternPS0003606681IPR004827Basic-leucine zipper domain
PfamPF141441.6E-20145202IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MADASSRTDT SIVVDTDDKN QRQNFLIFLN QVVQMENGQN GAIVPSNSSE PSDRSDRPMD  60
QKVVLRRLAQ NREAARKSRL RKKAYVQQLE SSKLKLASLE QELQKARQQG IFISSSGDQT  120
HAMSGNGAMT FDLEYTRWLE EQNKQINELR TAVNAHASDS DLRLIVDGIM AHYDEIFKLK  180
GAAAKADVFH ILSGMWKTPA ERYNISHVLV NFQLLVNQLE PLTEQQLMGL SSLEQSSHQA  240
EDALSQGMEA LQQSLAETLA GSLGPSGSSG NVANYMGQMA MAMGKLGTLE NFLRQADILR  300
QQTLHQMQRI LTIRQAARAL LAIHDYFSRL RALSSLWLAR PRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX4243170.0JX424317.1 Triticum monococcum TGA-type basic leucine zipper protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020199874.10.0transcription factor TGA2.2 isoform X1
SwissprotQ6IVC30.0TGA22_ORYSJ; Transcription factor TGA2.2
TrEMBLM7YRT50.0M7YRT5_TRIUA; Transcription factor HBP-1b(C1)
STRINGTRIUR3_16094-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.41e-124TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Chern M,Fitzgerald HA,Canlas PE,Navarre DA,Ronald PC
    Overexpression of a rice NPR1 homolog leads to constitutive activation of defense response and hypersensitivity to light.
    Mol. Plant Microbe Interact., 2005. 18(6): p. 511-20
    [PMID:15986920]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]