PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_13906-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 917aa    MW: 104704 Da    PI: 7.079
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_13906-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY26.81.1e-08887908122
                      ---SS-EEEEEEE--TT-SS-E CS
             WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                      ldDg++WrKYGqK++ ++++pr
  TRIUR3_13906-P1 887 LDDGFSWRKYGQKDILDAKHPR 908
                      59*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd147981.43E-2711138No hitNo description
SuperFamilySSF525401.4E-52161422IPR027417P-loop containing nucleoside triphosphate hydrolase
Gene3DG3DSA:3.40.50.3002.7E-14196303IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF009317.4E-48196449IPR002182NB-ARC
PRINTSPR003644.8E-13198213No hitNo description
PRINTSPR003644.8E-13274288No hitNo description
PRINTSPR003644.8E-13355369No hitNo description
SuperFamilySSF520586.46E-24486838IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.107.1E-16558837IPR032675Leucine-rich repeat domain, L domain-like
SuperFamilySSF1182902.88E-6886908IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.6E-6886908IPR003657WRKY domain
PROSITE profilePS508119.087886908IPR003657WRKY domain
SMARTSM007740.0031887917IPR003657WRKY domain
PfamPF031061.5E-5888908IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043531Molecular FunctionADP binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 917 aa     Download sequence    Send to blast
MEAAVVSVLR GAIGFLIAKL GDLLAGKYKL LKGAKGEIMF LKAELESMRA FLERMSEAEE  60
EPDKQAKLWA KEVCDLSYDI EDSVDEFIVL VECESDCEPH GFKGFIHRSM NLLTTMNTRH  120
RVAKEFRGLK SRVVEVSERR MRYKIDDAVS KQNKTTIDLR LLALYADTAG LVGIDGPRDE  180
LIRLMAGEEG GSAQLTKVLS IVGFGGLGKT TLANQIYQKL KWQFQCRAFV SVSQKPSIRI  240
ILRRMLSQVG YVAREGADME IWAEDELISE LRKFLMDKRY FIVIDDIWDE TTWNVIRCAL  300
PENLACCCNQ RDYIYKMKTL SNEDSRKLFF RRVFGSEDAC PLYLEEVSTQ ILKRCGGLPL  360
AIVTISSLLA SEQNKFKEHW VHIMNSLGPN FEVNPTLEGM RQILSLSYIN LPHYLKTCML  420
YLGMYPEDYI IWKNDLVRQW VAQGFVSKAH GKYPEDVAEG YFNELVNRGI IQPVDTDHNN  480
EVLSCRLHDM MLDLIIHKCR DENFITATDD IQDMIGLSDK VRRLSLYLDG TIDGTILETT  540
QLSQVRALAR FGNSAYAPPL LKFKHLRVLS LEFRWEIPDL TGISHLFQLR YLKIKTDGKI  600
QVPSDVVHLG RLQHLIVPRR TILPNGIGNM KSLCTLQEFD VGLNSIDNIR DLGDLINLRD  660
LRICDHLSKM DELHDMERRQ RLDVLTCSLE KLCDLRYLHM DYKIKVSYVL SSLFLRRLHM  720
LCPFPKVPNA IGELHNLFDL DLTIEVLEDD IAILAQLQSL NRLKLHIEGK PETEEKVVIC  780
RKGFPVLKHF WLFCIRMSQL TFEAGTMPSL EKLEVRINSP YGAAPTGIEH LLGLKEILVI  840
IGGCGDEGSC STRAALSALR KAIDMRSSRP TANIKCVDNW LFLGRLLDDG FSWRKYGQKD  900
ILDAKHPRLP KASSELT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j5t_C1e-49116774703Disease resistance RPP13-like protein 4
6j5t_F1e-49116774703Disease resistance RPP13-like protein 4
6j5t_G1e-49116774703Disease resistance RPP13-like protein 4
6j5t_L1e-49116774703Disease resistance RPP13-like protein 4
6j5t_O1e-49116774703Disease resistance RPP13-like protein 4
6j5u_A1e-49116774703Disease resistance RPP13-like protein 4
6j5v_A1e-49116774703Disease resistance RPP13-like protein 4
6j5w_A1e-49116774703Disease resistance RPP13-like protein 4
6j6i_C1e-49116774703Disease resistance RPP13-like protein 4
6j6i_F1e-49116774703Disease resistance RPP13-like protein 4
6j6i_G1e-49116774703Disease resistance RPP13-like protein 4
6j6i_L1e-49116774703Disease resistance RPP13-like protein 4
6j6i_O1e-49116774703Disease resistance RPP13-like protein 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020165044.10.0putative disease resistance RPP13-like protein 3 isoform X2
TrEMBLM8A8S40.0M8A8S4_TRIUA; Disease resistance protein RPM1
STRINGTRIUR3_13906-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP558
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45260.11e-07Disease resistance protein (TIR-NBS-LRR class)