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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_13720-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | BES1 | ||||||||
Protein Properties | Length: 245aa MW: 25645.5 Da PI: 6.6142 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 30.4 | 1.3e-09 | 2 | 78 | 72 | 149 |
DUF822 72 gskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa.......asllpvlsvlslvsss 149 g++p e+++ +g+s s sp+ss+q +sp++sy+asp+sssfps +s+ +++++++ + +lp+l++ s++++s TRIUR3_13720-P1 2 GCRPAERMDGIGCSVSPSPCSSYQ--------PSPRASYNASPTSSSFPSGASSPFLPHSNNmvngvdaTPILPWLQTFSNSTAS 78 899*********************........99999999999999999999999999988889998889999999999887766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 1.4E-10 | 2 | 72 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence Send to blast |
MGCRPAERMD GIGCSVSPSP CSSYQPSPRA SYNASPTSSS FPSGASSPFL PHSNNMVNGV 60 DATPILPWLQ TFSNSTASNK RPHLPPLLIH GGSISAPVTP PLSSPTARTP RMKTDWDESV 120 IQPPWHGSNS PCVISSTSPS SPTFSLMSSN PFSVFKEAIP GGGSSRMCTP GQSGTCSPVI 180 PGMARHPDVH MMDVVSDEFA FGSSTNGGAQ QATAGLVRAW EGERIHEDSG SDELELTLGS 240 SRTRS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | May function in brassinosteroid signaling. {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HG670306 | 1e-162 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020188462.1 | 1e-146 | protein BZR1 homolog 2 | ||||
Swissprot | Q0JPT4 | 1e-116 | BZR2_ORYSJ; Protein BZR1 homolog 2 | ||||
TrEMBL | M7ZMN0 | 1e-175 | M7ZMN0_TRIUA; Uncharacterized protein | ||||
STRING | TRIUR3_13720-P1 | 1e-176 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1366 | 38 | 112 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 3e-35 | BES1/BZR1 homolog 4 |
Publications ? help Back to Top | |||
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