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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
TRIUR3_11780-P1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
HD-ZIP |
Protein Properties |
Length: 289aa MW: 31545.3 Da PI: 5.094 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
TRIUR3_11780-P1 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 60.7 | 2.3e-19 | 27 | 79 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+ +f++eq++ Le++F+ + ++ +++ +LA++lgL+ rqV +WFqN+Ra++k
TRIUR3_11780-P1 27 KKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 79
456*************************************************9 PP
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2 | HD-ZIP_I/II | 122.5 | 2e-39 | 26 | 115 | 2 | 91 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
+k+r+s+eq+k+LE++F +++kLep++K +lareLglqprqva+WFqn+RAR+k+kqlE++y+aL++ ydal ++ ++L+k++++L +++
TRIUR3_11780-P1 26 RKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQYAALRDDYDALLSSYDQLKKDKQALLNQV 115
8*************************************************************************************9886 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009738 | Biological Process | abscisic acid-activated signaling pathway |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 289 aa
Download sequence Send
to blast |
MEQGEEDGDW MVEPAAGKKG GAMIDRKKRF SEEQIKSLES MFATQTKLEP RQKLQLAREL 60 GLQPRQVAIW FQNKRARWKS KQLERQYAAL RDDYDALLSS YDQLKKDKQA LLNQVCLYST 120 TYQVLVSPCS PAGGGVRRVL VVPVANARST GSVQLEKLAE MLREPGGAKC GDNAGAAARD 180 DVRLAVAGMS MKDEFVDAGG ASKLYSASEG CGGSGKLSLF GEEDDDAGLF LRPSLQLPTA 240 HDGGFTASGP AEYQQQSPSS FPFHSSWPSS AAEQTCSSSQ WWEFESPSE
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. {ECO:0000269|PubMed:10732669}. |
UniProt | Probable transcription factor that binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. {ECO:0000269|PubMed:10732669}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KT224374 | 0.0 | KT224374.1 Triticum aestivum cultivar RAC875 HDZipI-3 mRNA, complete cds. |