 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
TRIUR3_09240-P1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
| Family |
NF-YC |
| Protein Properties |
Length: 198aa MW: 20757.3 Da PI: 4.7126 |
| Description |
NF-YC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| TRIUR3_09240-P1 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YC | 152.3 | 9.2e-48 | 22 | 105 | 18 | 101 |
NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprdel 101
h+lPlarikki+kadedv+misaeaPvl++kacelfilelt+rswlhaeenkrrtl+++d+aaa++rtd+fdflvdivpr+e
TRIUR3_09240-P1 22 THQLPLARIKKIMKADEDVRMISAEAPVLFAKACELFILELTIRSWLHAEENKRRTLQRNDVAAAIARTDVFDFLVDIVPREEA 105
79*******************************************************************************986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 198 aa
Download sequence Send
to blast |
MENHQLPYTT QPPATGASGA PTHQLPLARI KKIMKADEDV RMISAEAPVL FAKACELFIL 60
ELTIRSWLHA EENKRRTLQR NDVAAAIART DVFDFLVDIV PREEAKEEPG SAALGFAAGG 120
VGAAGGGPAA GLPYYYPPMG QPAAPMMPAW HVPAWEPAWQ QGGADVDQGA GSFGEEGQGF 180
TGGHGGSAGF PPGPPSSE
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in the regulation of flowering time under long day (LD) conditions. Functions as repressor of flowering, independently of HD1 and GHD7. Controls flowering time by negatively regulating the expression of EHD1 and HD3A (PubMed:26542958). Component of the NF-Y/HAP transcription factor complex (By similarity). {ECO:0000250, ECO:0000269|PubMed:26542958}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Circadian-regulation under long day (LD) conditions. Expression increases at the end of the dark period, peaks in the beginning of the light period and gradually decreases during daytime. {ECO:0000269|PubMed:26542958}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | GU902795 | 0.0 | GU902795.1 Triticum monococcum nuclear transcription factor Y subunit C11 mRNA, complete cds. |
| GenBank | KM078729 | 0.0 | KM078729.1 Triticum aestivum CCAAT-binding transcription factor C (NFYC-D5) mRNA, complete cds. |
