PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_07596-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 222aa    MW: 24075.8 Da    PI: 7.1118
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_07596-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.13.7e-33143201159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      ldDgy+WrKYGqK vk+s +prsYYrCt+++C+vkk+v+r a+d+ +v++tYeg Hnh+
  TRIUR3_07596-P1 143 LDDGYRWRKYGQKAVKNSSNPRSYYRCTHPTCNVKKQVQRLAKDTAIVVTTYEGVHNHP 201
                      59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.7E-34129201IPR003657WRKY domain
SuperFamilySSF1182909.15E-29135202IPR003657WRKY domain
PROSITE profilePS5081128.966138203IPR003657WRKY domain
SMARTSM007741.4E-38143202IPR003657WRKY domain
PfamPF031066.1E-26144201IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MDGLHGDDEA HTFPPFPYFS APSTPPPLAS PLASSSDGQH SPLAAALQQL TPPPWPCTPP  60
DLTLQPAMGD VNWSSLFQTG PVAPPEQEEE AVQADQSGEN DGEAGGSGSG NKEKAKGSAG  120
RSGKKKASKP RFAFQTRSEN DILDDGYRWR KYGQKAVKNS SNPRSYYRCT HPTCNVKKQV  180
QRLAKDTAIV VTTYEGVHNH PCEKLMEALG PILKQLQFLS QF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A4e-26117200174Probable WRKY transcription factor 4
2lex_A4e-26117200174Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00539DAPTransfer from AT5G41570Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020179077.11e-150probable WRKY transcription factor 56
TrEMBLM7Z1801e-164M7Z180_TRIUA; Putative WRKY transcription factor 24
STRINGTRIUR3_07596-P11e-165(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP110038133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41570.12e-53WRKY DNA-binding protein 24