PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIUR3_06726-P1

Organism

Triticum urartu

Taxonomic ID

4572

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bZIP

Protein Properties

Length: 216aa MW: 24078.3 Da PI: 10.0235

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIUR3_06726-P1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.3	4.6e-15	164	206	5	47
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lkk TRIUR3_06726-P1 164 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLKK 206 79***************************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	6.4E-15	157	207	No hit	No description
SMART	SM00338	3.0E-11	160	215	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.702	162	207	IPR004827	Basic-leucine zipper domain
CDD	cd14707	1.98E-25	164	214	No hit	No description
Pfam	PF00170	4.5E-13	164	207	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.56E-11	164	207	No hit	No description
PROSITE pattern	PS00036	0	167	182	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence Send to blast
MPPELSKKTV DEVWKGIQDS PKRSGEEGSR RRRERQPTFG EMTLEDFLVK AGVVAEGHLK 60 DPIDLPANMG AVGSSVIEAA APSLNPGAHW LQQYLEPQHP RMAGPFMASH LGPQPLSVAT 120 GAIMEPIYPD GQITSPMLDA LSDPQTARRK RGASDGVTDK VVERRQKRMI KNRESAARSR 180 ARKQAYTNEL ENKVSRLEEE NERLKKQKVV SYFVSH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	18	23	DSPKRS

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	EU307112	0.0	EU307112.2 Triticum aestivum FD-like 2 protein mRNA, partial cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020181441.1	1e-144	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	6e-46	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	M7Z387	1e-157	M7Z387_TRIUA; ABSCISIC ACID-INSENSITIVE 5-like protein 2
STRING	TRIUR3_06726-P1	1e-158	(Triticum urartu)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2707	38	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	6e-45	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]