PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_06081-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 368aa    MW: 39640.5 Da    PI: 8.7521
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_06081-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.81.1e-09137184455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +h+ +Er RR++i +++  L++l+P +    +k + Ka +L + ++Y++sLq
  TRIUR3_06081-P1 137 SHSLAERVRREKISQRMKLLQDLVPGC----NKVVGKAVMLDEIINYVQSLQ 184
                      8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474598.77E-17131203IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.03E-9131188No hitNo description
PROSITE profilePS5088815.256133183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.5E-17134201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.9E-7137184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-10139189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MALKGASDGN ARKRKAGGGG SKGKGKDASV STTSAKDLLA KVRKTHTDFC SVLEGARGRS  60
HPASTAVAVA VQEDSASKRC RSMSMEEAEE NSGKGKAAQS SSENGGRRQG KDGASKLPEP  120
PKDFIHVRAR RGEATDSHSL AERVRREKIS QRMKLLQDLV PGCNKVVGKA VMLDEIINYV  180
QSLQRQVEFL SMKLATVNPQ LDFNSLPSLL AKDMQQQSCG QLQQGSSHFP LDASGAPLPY  240
MGGQGSSDPL GCGMSDGGGM GDDHGAMHPL DQAFCRPMGS QQQHFLSDAA SQVGAFWQDL  300
QSVVQMDMGQ SQEIATSSNS YDGECKSSFN FSLNSEDRHH FQPKIRMLNF VRSCRSGSLQ  360
TVHMKMEL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3546280.0AK354628.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1009E13.
GenBankAK3619380.0AK361938.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2001G10.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020155799.11e-171transcription factor bHLH77-like isoform X1
TrEMBLM7ZVN30.0M7ZVN3_TRIUA; Transcription factor bHLH49
STRINGTRIUR3_06081-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP91938137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.32e-54bHLH family protein