PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_05747-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 576aa    MW: 64666.9 Da    PI: 6.7592
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_05747-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3345.4e-11210294997
                      HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
               B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                       +lk + + lp k +e+++++ +++ t++le ++   + v+   +k+++  +vl+ GW++ v+an+++e+D +vF  +g  +++l v+++
  TRIUR3_05747-P1 210 VNLKDCSVNLPLKLVEHFKED-TSKATIQLEAPNDMIYGVEA--CKHGDDqIVLQYGWNNLVDANRIQENDLLVFITKG--TKRLEVRIL 294
                      45678999*******777666.5678****************..5555545*************************665..444577776 PP
2B343.55.5e-14476572399
                      EE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
               B3   3 kvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 
                       v ++++  + ++l +  ++ ++h      ++++l+l+ e g + + +l ++++++r ++++GW++Fv +n+++egD+++F++ ++ ++ +++v
  TRIUR3_05747-P1 476 VVVMTKSRINADQLGFRMEYGARHiP-HIGRKMDLMLQAEGGTEQRTRLVIDQNGKR-WIRRGWQQFVTENKVREGDICLFERGEStKKLRMTV 567
                      45567777778889999999888863.335789****************99888877.79**********************887779999999 PP

                      EEE-S CS
               B3  95 kvfrk 99 
                       ++rk
  TRIUR3_05747-P1 568 YFIRK 572
                      99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM010190.01631122IPR003340B3 DNA binding domain
PfamPF023621.9E-741121IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.2E-1243123IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019367.06E-1444123IPR015300DNA-binding pseudobarrel domain
CDDcd100171.37E-1045120No hitNo description
PROSITE profilePS508637.88185122IPR003340B3 DNA binding domain
SuperFamilySSF1019366.28E-15194296IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.103.9E-15195296IPR015300DNA-binding pseudobarrel domain
CDDcd100174.72E-11199294No hitNo description
SMARTSM010197.9E-6201297IPR003340B3 DNA binding domain
PROSITE profilePS508639.827202297IPR003340B3 DNA binding domain
PfamPF023624.4E-8209293IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.6E-17467572IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019369.42E-17468573IPR015300DNA-binding pseudobarrel domain
CDDcd100176.76E-14473568No hitNo description
SMARTSM010191.7E-8475573IPR003340B3 DNA binding domain
PfamPF023626.8E-13475572IPR003340B3 DNA binding domain
PROSITE profilePS508639.869509573IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 576 aa     Download sequence    Send to blast
MTRRSSLLWL RGGSGTACIL FLTMLCNTWP FLQHSPAIGR KEEDLCIPWE VANHLGSMIS  60
ETIKLEAPNG IFLIGVCRKT GELVLRAGWD KFVAMHHIKE NYSFWFVYRG NSTFKVHIFN  120
SNGHEKATSC SKPPSESFGG VPPAATCDHH VLNEQVPSVS GNVQTSTDSG YSMLPGCHLT  180
KAQDDKVREL ACTMRSQVPL YVAVMNKSNV NLKDCSVNLP LKLVEHFKED TSKATIQLEA  240
PNDMIYGVEA CKHGDDQIVL QYGWNNLVDA NRIQENDLLV FITKGTKRLE VRILGTSVHQ  300
RTSSCFDVGN ISSTQEIRED SLEITDPPPH TDYYVSSSDD DHIMEEGYYV SSSDDDHIAE  360
EDYVSSSDAD HIVEEGTRKS GRRQKQAPSR YAKAQKVAST SSPSAAKSGY EAHKLNERAS  420
VEFGINLEPH SSTSNLEGPS QYPYVLSEGR TSLSSVEKEK VEEKVQAIQS ELPIFVVVMT  480
KSRINADQLG FRMEYGARHI PHIGRKMDLM LQAEGGTEQR TRLVIDQNGK RWIRRGWQQF  540
VTENKVREGD ICLFERGEST KKLRMTVYFI RKSSQT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLT1LLQ70.0T1LLQ7_TRIUA; Uncharacterized protein
STRINGTRIUR3_05747-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16378713
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.19e-09B3 family protein