PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_05083-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bZIP | ||||||||
Protein Properties | Length: 154aa MW: 17166.4 Da PI: 9.0804 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 37.3 | 5.9e-12 | 30 | 89 | 3 | 62 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e +r rrk++NRe+ArrsR RK++ ++ L v++L+++ +++ l + +++ +l+++ TRIUR3_05083-P1 30 EKRRKRRKESNRESARRSRVRKQQHLDDLSLQVDQLKNQSQQMNMVLGMTTQNLVALQAQ 89 5689*************************************9998888777776666665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.4E-10 | 28 | 92 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.427 | 30 | 93 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 6.2E-9 | 30 | 78 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 9.5E-9 | 32 | 89 | No hit | No description |
SuperFamily | SSF57959 | 1.27E-10 | 32 | 87 | No hit | No description |
CDD | cd14702 | 1.92E-14 | 33 | 72 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 35 | 50 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009845 | Biological Process | seed germination | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence Send to blast |
MSSGTSFTSS QGTRSSRSAE DCPDLRAQME KRRKRRKESN RESARRSRVR KQQHLDDLSL 60 QVDQLKNQSQ QMNMVLGMTT QNLVALQAQN SVMQTQKMEL ESRLCALGEI ICCMNSITST 120 ANPVAAMGAT TSSAYDIFGA GSTWSQPIDL YQCF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 30 | 36 | KRRKRRK |
2 | 32 | 37 | RKRRKE |
3 | 44 | 50 | RRSRVRK |
4 | 44 | 51 | RRSRVRKQ |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00239 | DAP | Transfer from AT1G75390 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK364428 | 0.0 | AK364428.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2025A24. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020172439.1 | 1e-105 | bZIP transcription factor 44-like | ||||
TrEMBL | A0A3B6KEU4 | 1e-109 | A0A3B6KEU4_WHEAT; Uncharacterized protein | ||||
TrEMBL | A0A446T1Q1 | 1e-109 | A0A446T1Q1_TRITD; Uncharacterized protein | ||||
TrEMBL | M7YVF8 | 1e-109 | M7YVF8_TRIUA; Ocs element-binding factor 1 | ||||
STRING | Traes_5AL_D9A4DFF71.1 | 1e-110 | (Triticum aestivum) | ||||
STRING | TRIUR3_05083-P1 | 1e-110 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3740 | 32 | 76 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75390.1 | 3e-11 | basic leucine-zipper 44 |