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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
TRAES3BF093600190CFD_t1 |
Common Name | TRAES_3BF093600190CFD_c1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
Trihelix |
Protein Properties |
Length: 312aa MW: 35117.4 Da PI: 7.9726 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
TRAES3BF093600190CFD_t1 | genome | IWGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 35 | 3.7e-11 | 55 | 147 | 1 | 85 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkr....tsesss 77
+Wt++ + aL++a e+ +r++l + W evs+ + r +g+ s qC+++++ l+k ++k+ke+++ +++s s
TRAES3BF093600190CFD_t1 55 EWTEDSTFALLDAWGERFACDGRRSLSADEWLEVSRIVaaaasRPTGY-FSESQCRNRIDTLRKMFRKEKERSRLAahrsSNPSPS 139
5*************************************8885433443.4889******************998652222467779 PP
trihelix 78 tcpyfdql 85
+++yfd++
TRAES3BF093600190CFD_t1 140 KWVYFDKM 147
9*****99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 312 aa
Download sequence Send
to blast |
MDHDAAAASP SASPSSSGAS PSPRSKRRRT DRYALGFEFA PRSAPSAPAP RTTPEWTEDS 60 TFALLDAWGE RFACDGRRSL SADEWLEVSR IVAAAASRPT GYFSESQCRN RIDTLRKMFR 120 KEKERSRLAA HRSSNPSPSK WVYFDKMLSL MCPPTPPPLL PPLTPLVTRR RDTHPVPRRS 180 WGVDVGELVL AGCSKVVPGN SVPDAQLREK QTYETGAVQG EEFAILTEAI HRLREVYERV 240 ESSRRQHMAE LNRMRKDMQR DLEVRRREIL EKAQMEIASL EEEDAKEGAV NNRLEDYNGV 300 EEQNNGPLDA SP
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG670306 | 0.0 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |