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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
TRAES3BF081300020CFD_t1 |
Common Name | TRAES_3BF081300020CFD_c1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
LBD |
Protein Properties |
Length: 248aa MW: 25721.7 Da PI: 9.8753 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
TRAES3BF081300020CFD_t1 | genome | IWGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 101.6 | 7.5e-32 | 20 | 119 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilklqq 85
aCa+Ck++rrkC+++C la yfpa+++++f+++h +FG++n++kl+ka +e r++a+++l++eA++r rdP +G+++ ++ l++
TRAES3BF081300020CFD_t1 20 ACAVCKHQRRKCEPNCELAAYFPANRMNDFRALHLVFGVANLTKLIKANATEAaRRRAAETLTWEARWRERDPSEGCYREVSCLRR 105
7**********************************************9977766******************************** PP
DUF260 86 qleqlkaelallke 99
+ + l+ae a+l++
TRAES3BF081300020CFD_t1 106 ENAVLRAENAALRR 119
*******9998775 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 248 aa
Download sequence Send
to blast |
MTGGVNGNGG GGGGGGGGGA CAVCKHQRRK CEPNCELAAY FPANRMNDFR ALHLVFGVAN 60 LTKLIKANAT EAARRRAAET LTWEARWRER DPSEGCYREV SCLRRENAVL RAENAALRRR 120 ADQCACCATT LHHQQQQQQI LLVSAYNNGA RPPGGVLHGA STGVVPGGFY SGNAGAVRAA 180 NGNGPMPARP HVSAPAPQTT MAGYAQGDRH HAASGGANGA GAPRPGAAGQ AEPREKSSAR 240 CDAQRTAS
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG670306 | 0.0 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |