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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
TRAES3BF071400020CFD_t1 |
Common Name | TRAES_3BF071400020CFD_c1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
MYB |
Protein Properties |
Length: 307aa MW: 34010.9 Da PI: 5.2214 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
TRAES3BF071400020CFD_t1 | genome | IWGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 54.6 | 2.4e-17 | 20 | 67 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg W++eEde+l++ + ++G+g+W++++r g+ R++k+c++rw +yl
TRAES3BF071400020CFD_t1 20 RGLWSPEEDEKLYNHIIRYGNGCWSSVPRLAGLERCGKSCRLRWINYL 67
788*******************************************97 PP
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2 | Myb_DNA-binding | 50.3 | 5.6e-16 | 73 | 116 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+++++E++l+v ++k lG++ W+ Ia+ ++ gRt++++k++w++
TRAES3BF071400020CFD_t1 73 RGSFSQQEEDLIVSLHKILGNR-WSQIASQLP-GRTDNEIKNFWNS 116
899*******************.*********.***********96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 307 aa
Download sequence Send
to blast |
MGREAAAAVA CSSNKPKLRR GLWSPEEDEK LYNHIIRYGN GCWSSVPRLA GLERCGKSCR 60 LRWINYLRPD LKRGSFSQQE EDLIVSLHKI LGNRWSQIAS QLPGRTDNEI KNFWNSCIKK 120 KLRQQRIDPT THESLNDAAA VAEPHDKCKQ LVPAAEDGCF GGSVGSDDFL APHSPVDCSF 180 DPMSVTNVPA MRMQGSYSLC DYAGVGSDAT TYSAYTGGGD SSSNSNGTGT GTWTCGNVEP 240 LPHMDMFRDD AEPYPFDPTK FSPWHQQQPP DDDRGSAVFP IRSLSRDLPE SCFELARGAL 300 EDEFDFM
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Functional Description ? help
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Source |
Description |
UniProt | Possible transcription activator in response to an external signal. May be involved in the regulation of flavonoid biosynthesis. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG670306 | 0.0 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |