PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRAES3BF027700210CFD_t1
Common NameTRAES_3BF027700210CFD_c1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 477aa    MW: 51918.1 Da    PI: 7.3258
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRAES3BF027700210CFD_t1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.11e-09192232545
                              CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                              k  rr+++NReAAr+sR+RKka+i++Le    +L++  ++L
  TRAES3BF027700210CFD_t1 192 KSLRRLAQNREAARKSRLRKKAYIQNLESSRLKLTQLEQEL 232
                              788*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.7E-7188251IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.174190234IPR004827Basic-leucine zipper domain
CDDcd147082.33E-22192244No hitNo description
PfamPF001703.6E-7192232IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.87E-7192235No hitNo description
Gene3DG3DSA:1.20.5.1701.5E-7193236No hitNo description
PROSITE patternPS000360195210IPR004827Basic-leucine zipper domain
PfamPF141446.0E-32274349IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    Send to blast
MESRRGGGGP AAAAAAAGDP RGPMPGFGAP QHTIPTNVNV MQPSRVADLG ALAHSAGFRI  60
EDLANFSTNN LFNLKPNTHA YTSDPLQFGN YGKSISPTDL ATTAAAAAAV TAVDPQALLQ  120
QKGVQPNLVA LRTHNNDNWG ESSMADTSPR TDTSTDPDID IDERNQMFEQ GQLAAPTASD  180
SSDKSRDKLD HKSLRRLAQN REAARKSRLR KKAYIQNLES SRLKLTQLEQ ELQRARQQGI  240
FISSSGDQSQ SASGNGAVAF DMEYARWLEE HNKHINELRA AANAHAGDDD LRKIVDSIMS  300
QYDEFFRLKG VAAKADVFHV LSGMWKTPAE RCFMWLGGFR SSELLKLLAG QLEPLTEQQL  360
TGICNLQQSS QQAEDALSQG MEALQQSLAE TLASGSLGPA GSSGNVASYM GQMAMAMGKL  420
GTLENFLRQA DNLRLQTLQQ MQRILTTRQS ARALLAISDY FSRLRALSSL WLARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankWHTHBP1BC10.0D12921.2 Triticum aestivum mRNA for transcription factor HBP-1b(c1), partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020180345.10.0transcription factor HBP-1b(c1) isoform X1
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A077RVB70.0A0A077RVB7_WHEAT; Uncharacterized protein
STRINGTraes_3DL_A71427183.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-123bZIP family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]