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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
TRAES3BF026500080CFD_t1 |
Common Name | TRAES_3BF026500080CFD_c1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
MYB |
Protein Properties |
Length: 272aa MW: 29352 Da PI: 6.6323 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
TRAES3BF026500080CFD_t1 | genome | IWGSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 54.4 | 2.9e-17 | 29 | 76 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT+eEde lv+ v++ G g+W+t +r+ g+ R++k+c++rw +yl
TRAES3BF026500080CFD_t1 29 RGPWTAEEDEVLVRFVAREGEGRWRTLPRRAGLLRCGKSCRLRWMNYL 76
89******************************99************97 PP
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2 | Myb_DNA-binding | 46.1 | 1.1e-14 | 83 | 127 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
g+ ++E++l++++++ lG++ W++Ia +++ gRt++++k++w+++l
TRAES3BF026500080CFD_t1 83 GPIAEDEEDLILRLHRVLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 127
666799***************.*********.************986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0010090 | Biological Process | trichome morphogenesis |
GO:0010468 | Biological Process | regulation of gene expression |
GO:0048354 | Biological Process | mucilage biosynthetic process involved in seed coat development |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 272 aa
Download sequence Send
to blast |
MARRKPPAQH GARSEDGQAQ STAPPPLKRG PWTAEEDEVL VRFVAREGEG RWRTLPRRAG 60 LLRCGKSCRL RWMNYLRPDI KRGPIAEDEE DLILRLHRVL GNRWSLIAGR LPGRTDNEIK 120 NYWNSHLSKK LIAQGLDPRT HMPLAAAPGK TAAATHKTTA APVVVPPQPP PPPGPVLPTS 180 SAAGTGSDGH DNPGDGGNDD LAATMSVDAD GFEGFGDQLL ADYAASRGGF EDVMGCPMVD 240 DDTFTSFLDS LMNERQLAAD HKGVMNDQGG AI
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator, when associated with BHLH002/EGL3/MYC146, BHLH012/MYC1 or BHLH042/TT8. {ECO:0000269|PubMed:15361138}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK376562 | 0.0 | AK376562.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3127N16. |