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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
TRAES3BF015800060CFD_t1 |
Common Name | TRAES_3BF015800060CFD_c1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
Trihelix |
Protein Properties |
Length: 302aa MW: 32450 Da PI: 9.2852 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
TRAES3BF015800060CFD_t1 | genome | IWGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 66.9 | 4.3e-21 | 23 | 93 | 1 | 73 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrts 73
rWt++e+l+Li+a+r +e+r + +W+ vs+++r++g+er+p qC+++w nl+++ kki ++ekk++
TRAES3BF015800060CFD_t1 23 RWTRHETLVLIQAKRVTEQRAAQ--PVRLKWAVVSAYCRRHGVERGPMQCRKRWGNLSWDLKKIVAWEKKHAT 93
8****************998655..5899*****************************************943 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
GO:0050777 | Biological Process | negative regulation of immune response |
GO:0071219 | Biological Process | cellular response to molecule of bacterial origin |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 302 aa
Download sequence Send
to blast |
MMSANGDSPA GAAVTTPRSR LPRWTRHETL VLIQAKRVTE QRAAQPVRLK WAVVSAYCRR 60 HGVERGPMQC RKRWGNLSWD LKKIVAWEKK HATAAAAVAG DADSAAPERE SFWDMRGEER 120 RARQLPSSFD REVYDAIVGA GGAANQLKPD SAEEMELADD ADEHPPSPMM VMPIQARMYV 180 PPASSRSQHE CSDPATESAK KPASDKNSTS QQDSEATFGA GVGAEDTDTA TATPTAAAGT 240 TSMGRQMSEA LERATVCWRS SWRRRGRTGT RTGSTGGRSS PPSTSSPTPP PGSPRGSDVS 300 TG
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG670306 | 0.0 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |