PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Spipo8G0029700
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Araceae; Lemnoideae; Spirodela
Family bZIP
Protein Properties Length: 166aa    MW: 18718.4 Da    PI: 9.7659
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Spipo8G0029700genomeMIPS/IBISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.61.7e-1579138160
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                     +ke kr +r+ +NR++A+  R+RKka++  Le+kv eLe+ N++L ++l++l++e + l+
  Spipo8G0029700  79 DKEQKRLKRLLRNRVSAQQARERKKAYLTDLETKVNELEKRNSELEERLSTLQNENQMLR 138
                     5899***************************************************99776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PRINTSPR000417.9E-57894IPR001630cAMP response element binding (CREB) protein
SMARTSM003384.2E-1679143IPR004827Basic-leucine zipper domain
PfamPF001707.4E-1480139IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.51881144IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.94E-1383139No hitNo description
Gene3DG3DSA:1.20.5.1702.3E-1683139No hitNo description
CDDcd147043.67E-1684135No hitNo description
PROSITE patternPS00036086101IPR004827Basic-leucine zipper domain
PRINTSPR000417.9E-596116IPR001630cAMP response element binding (CREB) protein
PRINTSPR000417.9E-5116133IPR001630cAMP response element binding (CREB) protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
MQEQGTSSFQ SSSDRSSSSA AHQTEVNGGL ESDDEIRRVP DFGGETAAGP STSGPRQDRA  60
RASSAEAGQQ RKRGRNPADK EQKRLKRLLR NRVSAQQARE RKKAYLTDLE TKVNELEKRN  120
SELEERLSTL QNENQMLRHI CNSFHPENAT QGDWMKARDR DRESF*
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that promotes photomorphogenesis in the light and positively regulates fruit pigmentation and fruit nutritional quality. Probably acts downstream of the light receptor network and directly affects transcription of light-induced genes. {ECO:0000269|PubMed:15178762}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024925020.13e-54transcription factor HY5-like isoform X1
SwissprotQ9SM508e-52HY5_SOLLC; Transcription factor HY5
TrEMBLA0A1D1Z7S22e-55A0A1D1Z7S2_9ARAE; Transcription factor HY5
STRINGPGSC0003DMT4000535769e-51(Solanum tuberosum)
STRINGXP_010110356.11e-50(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP140838111
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.14e-50bZIP family protein
Publications ? help Back to Top
  1. Wang F, et al.
    Light Signaling-Dependent Regulation of Photoinhibition and Photoprotection in Tomato.
    Plant Physiol., 2018. 176(2): p. 1311-1326
    [PMID:29146776]
  2. Liu CC, et al.
    The bZip transcription factor HY5 mediates CRY1a-induced anthocyanin biosynthesis in tomato.
    Plant Cell Environ., 2018. 41(8): p. 1762-1775
    [PMID:29566255]