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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Spipo8G0022800 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Araceae; Lemnoideae; Spirodela
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Family |
WRKY |
Protein Properties |
Length: 386aa MW: 41557.6 Da PI: 8.8391 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Spipo8G0022800 | genome | MIPS/IBIS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 97.4 | 9.5e-31 | 191 | 249 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY+++Hnh+
Spipo8G0022800 191 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSDHNHP 249
699************************998****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009555 | Biological Process | pollen development |
GO:0009793 | Biological Process | embryo development ending in seed dormancy |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 386 aa
Download sequence Send
to blast |
MCSYFSERVG GEQGDLADIV RASSCGKVPG QAHQVIPVEW QLSMETINFS PSMESSADDR 60 GNTICDFVGT TFFDGPETAG GLVKVGMVND EGAAASMQRV LSGGNDIRRP GDDFSRVLQI 120 SPREIKPQLL VADRMKTNGG SRSSPLDQEG SRISSSQLLG TKKRKTQTKK VVCIAAPPAG 180 GGRPGGEVVP SDLWAWRKYG QKPIKGSPYP RGYYRCSSSK GCSARKQVER SRTDPNMLVI 240 TYTSDHNHPW PTQRNSLAGS TRSRPAKNGS SATKSSPSDR KPPLPAVAGH HAVKEEEARE 300 MKKTVDSSEK RELSLVFDAN CKVLMNSSSQ PDDFFADLGE LDASDPLGLA FSTKALMGVE 360 RENKDPLAIF DWAANSSTET RKGGP*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |