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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Spipo6G0056800 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Araceae; Lemnoideae; Spirodela
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| Family |
NAC |
| Protein Properties |
Length: 282aa MW: 31521.6 Da PI: 6.5357 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Spipo6G0056800 | genome | MIPS/IBIS | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 171.2 | 3.3e-53 | 13 | 140 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
lppGfrFhPtdeelvv+yL++k+++++l++ +i+evd+yk++Pw+Lp+++ +++ewyfF++rd+ky++g+r+nra+ sgyWkatg dk+v+ +
Spipo6G0056800 13 LPPGFRFHPTDEELVVYYLCRKAAHQHLPV-PIIAEVDLYKYDPWQLPEMALFGKREWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPVTPA 106
79****************************.88***************76667899*************************************98 PP
NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
++++vg+kk Lvfy+g+apkg+kt+W+mheyrl
Spipo6G0056800 107 gSDRAVGIKKALVFYSGKAPKGVKTNWIMHEYRL 140
67788***************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 282 aa
Download sequence Send
to blast |
MLRTRDAEAE LNLPPGFRFH PTDEELVVYY LCRKAAHQHL PVPIIAEVDL YKYDPWQLPE 60
MALFGKREWY FFTPRDRKYP NGSRPNRAAG SGYWKATGAD KPVTPAGSDR AVGIKKALVF 120
YSGKAPKGVK TNWIMHEYRL ANINRAAKKG GGSLRLDDWV LCRLYNKKND WEKRRPVADA 180
GEDTGSESLR TPESDVENEV APPEVAASAA PEEYAASSPE FPRVVKEDND WFMDLNLDDL 240
QSSFMAFNGA APVRDLSYQD YLLAGLASPQ LRPGIGGLPP F*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in stress response. {ECO:0000250|UniProtKB:Q7F2L3}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by salt stress (PubMed:18813954, PubMed:20632034). Induced by dehydration, cold stress and methyl jasmonate (PubMed:20632034). {ECO:0000269|PubMed:18813954, ECO:0000269|PubMed:20632034}. |
| Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Science, 2003. 301(5631): p. 376-9
[PMID:12869764] - Taga Y, et al.
Role of OsHSP90 and IREN, Ca2+ dependent nuclease, in plant hypersensitive cell death induced by transcription factor OsNAC4.
Plant Signal Behav, 2009. 4(8): p. 740-2
[PMID:19820348] - Xia N, et al.
Characterization of a novel wheat NAC transcription factor gene involved in defense response against stripe rust pathogen infection and abiotic stresses.
Mol. Biol. Rep., 2010. 37(8): p. 3703-12
[PMID:20213512] - Takasaki H, et al.
The abiotic stress-responsive NAC-type transcription factor OsNAC5 regulates stress-inducible genes and stress tolerance in rice.
Mol. Genet. Genomics, 2010. 284(3): p. 173-83
[PMID:20632034] - Nakayama A, et al.
Genome-wide identification of WRKY45-regulated genes that mediate benzothiadiazole-induced defense responses in rice.
BMC Plant Biol., 2013. 13: p. 150
[PMID:24093634] - Ootsubo Y,Hibino T,Wakazono T,Mukai Y,Che FS
IREN, a novel EF-hand motif-containing nuclease, functions in the degradation of nuclear DNA during the hypersensitive response cell death in rice.
Biosci. Biotechnol. Biochem., 2016. 80(4): p. 748-60
[PMID:26766411]
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