|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Spipo4G0026900 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Araceae; Lemnoideae; Spirodela
|
Family |
GeBP |
Protein Properties |
Length: 348aa MW: 38506.5 Da PI: 8.5743 |
Description |
GeBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Spipo4G0026900 | genome | MIPS/IBIS | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 91.8 | 7.9e-29 | 147 | 241 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96
+f+r+wseeDe+ lLq+lid++++ g++ps+ id +++ ++ +++++s+sq+ eKirrLK+Kf+ v+k + + p + k+hd+ +fels+kiW
Spipo4G0026900 147 AFERVWSEEDEMKLLQALIDCQEEYGVEPSSSIDLIHRHIRVTLHMEFSRSQVYEKIRRLKQKFEATVSK-MRSNPPGVIKPHDRAMFELSQKIW 240
599*******************************************************************.889999****************** PP
DUF573 97 g 97
Spipo4G0026900 241 T 241
6 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 348 aa
Download sequence Send
to blast |
MVTDATKKSR KTPPAASPGK RKPRKLQRGP EASPLGAESE ELPSDPEGAS LGEKIKIANI 60 AKVPGGEKLE NSKGSDAPPV EEKKTENQSD PDAADGEGKK KKSGSKRKNK EVEIETPEEE 120 SMKRRRQNDR EPSGKEAFLN SAHKKGAFER VWSEEDEMKL LQALIDCQEE YGVEPSSSID 180 LIHRHIRVTL HMEFSRSQVY EKIRRLKQKF EATVSKMRSN PPGVIKPHDR AMFELSQKIW 240 TAEQVAPPVT AMGNEYTGVG ATEEEAGASL PHPYLRDAVS QLEKETGYYA GGSITKGFQL 300 LKPSEAAKLE KSWKAHCSAS MKIFFENCKL KNELLQACIQ ALESHTP*
|
Nucleic Localization
Signal ? help
Back to Top |
|
No. |
Start |
End |
Sequence |
1 | 105 | 125 | KRKNKEVEIETPEEESMKRRR |
Best hit in Arabidopsis thaliana ? help
Back to Top |
Hit ID |
E-value |
Description |
AT1G61730.1 | 5e-19 | DNA-binding storekeeper protein-related transcriptional regulator |