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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Spipo2G0044600 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Araceae; Lemnoideae; Spirodela
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Family |
Trihelix |
Protein Properties |
Length: 282aa MW: 32390.2 Da PI: 5.0603 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Spipo2G0044600 | genome | MIPS/IBIS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 64 | 3.3e-20 | 21 | 103 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergfer...spkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
W +qe+ Li+a++e++ +l+rg+lk+++Weev++ + ++ g+ r s +qC++k+e+l++ry+++k+++ s++p+f++++
Spipo2G0044600 21 WLDQETAFLIDAYEERWYALKRGQLKAHQWEEVASGVaARLGLIRppkSGTQCRHKIEKLRQRYRAEKQRSVP------SRWPFFERMD 103
***********************************9977888865444889*****************99986......58*******8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 282 aa
Download sequence Send
to blast |
MVVGEGAAAP PRKHGGPGQP WLDQETAFLI DAYEERWYAL KRGQLKAHQW EEVASGVAAR 60 LGLIRPPKSG TQCRHKIEKL RQRYRAEKQR SVPSRWPFFE RMDRLEHGPS PISVRPPPPH 120 PPPVAEGHKE EEEDEEEDEG SEGVDGSGED GAEEEEEEEE EEEGFNGNTR SINGILNEDE 180 LLHQKISRSK SYGEEDISGD GERGALRELV VTVKRFREGF VRMEMKRMEL MREMERDWIQ 240 METRRAEMLV ESQRHLFDTI SRAKCLRMPW LHFVHAKASS I*
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