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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Spipo29G0013300 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Araceae; Lemnoideae; Spirodela
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Family |
WRKY |
Protein Properties |
Length: 274aa MW: 29402.4 Da PI: 6.7727 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Spipo29G0013300 | genome | MIPS/IBIS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 84.2 | 1.2e-26 | 121 | 181 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK++k++++pr+Y+rCt++ gC+++k+v++s+e+p+ ++itY g+H+++
Spipo29G0013300 121 EDGYTWRKYGQKPIKSATHPRGYFRCTHKhdqGCQATKRVQKSEENPSEFIITYAGNHTCK 181
8***************************99999**************************96 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009862 | Biological Process | systemic acquired resistance, salicylic acid mediated signaling pathway |
GO:0009864 | Biological Process | induced systemic resistance, jasmonic acid mediated signaling pathway |
GO:0010200 | Biological Process | response to chitin |
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
GO:0050832 | Biological Process | defense response to fungus |
GO:1900056 | Biological Process | negative regulation of leaf senescence |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 274 aa
Download sequence Send
to blast |
MEVGVVKDLH PGQRKSVVRE LTRGRESAIR LREMQGLSSG DGGRLAEEVV ACFTRVLAAM 60 DQGELSEVCQ RTSSASSGDW KNAASTGKRT PQLAGDGGGG AHRRRRSSSS QAWKVTSTSL 120 EDGYTWRKYG QKPIKSATHP RGYFRCTHKH DQGCQATKRV QKSEENPSEF IITYAGNHTC 180 KDAGRSPAAG AGGDDGGPFR IYFNCPSSAP SSFPSSKPEA DDDCDTDALS NLSGNGSSSD 240 FFSLPELLPV PEPMTPQFDD GVFDLDPLPF SFT*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6ir8_A | 1e-21 | 115 | 181 | 3 | 69 | OsWRKY45 |